Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L09
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.54 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   1.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   3.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.8  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 13/56 (23%), Positives = 29/56 (51%)
 Frame = -2

Query: 622 IILFHCSIF*YVLLTISLCNLVRTKIEVSVNQHVLKELC*FKHKNRFKILQYRVII 455
           +  FH S   YV++   L N+V   +E+ +   ++ +LC   +  +  I++ ++ I
Sbjct: 276 VFFFHLSDVRYVMVVYLLKNVVLYGLELFILAKIVTDLCQEANSTKKLIVKIKIDI 331


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 225 CIFYFYLHFVLY 190
           CI+YFY  F+L+
Sbjct: 237 CIYYFYYAFILF 248



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 225 CIFYFYLHFVLY 190
           CI+YFY  F+++
Sbjct: 145 CIYYFYCAFIIF 156



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 225 CIFYFYLHFVLY 190
           C++YFY  F+++
Sbjct: 112 CVYYFYYAFIIF 123



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 225 CIFYFYLHFVLY 190
           CI+YFY  F+++
Sbjct: 211 CIYYFYSAFIIF 222


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -2

Query: 568 CNLVRTKIEVSVNQHVLKELC*FKHKNRFKILQYRVII 455
           CN     + V+ N   +  +C   HK  F+++Q+  ++
Sbjct: 195 CNDPLVALVVNENNTTVNNICQATHKQLFQLVQWAKLV 232


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 23  YAQTVTFLIFFNKLHKHKRIYLIINYAI-SIYRL 121
           Y+Q V      NKL+ H+ +  I+ Y I +IY +
Sbjct: 218 YSQLVFMCKKINKLYGHQLLLTILTYLIWTIYEM 251


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/33 (21%), Positives = 20/33 (60%)
 Frame = -2

Query: 583 LTISLCNLVRTKIEVSVNQHVLKELC*FKHKNR 485
           +T+ LC ++ T + + +   + + +  F++KN+
Sbjct: 314 VTLELCGMISTYLIIMIQLDLARTVPKFENKNK 346



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +2

Query: 47  IFFNKLHKHKRIYLIINYAISIYRLKSCYN 136
           IFF+K+ +  + + ++ Y+I+  R+    N
Sbjct: 98  IFFDKIQRIDKQFGLLGYSINYRRISIFVN 127


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/37 (18%), Positives = 17/37 (45%)
 Frame = +3

Query: 135 IQRILSKNYCSKVPSNPVSTVQNEDKNKICIDPSTIT 245
           ++ +L++    K P N     Q  D N    + ++++
Sbjct: 126 LRALLTRPQAKKTPPNQYENFQQYDNNNFSAEENSVS 162


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/37 (18%), Positives = 17/37 (45%)
 Frame = +3

Query: 135 IQRILSKNYCSKVPSNPVSTVQNEDKNKICIDPSTIT 245
           ++ +L++    K P N     Q  D N    + ++++
Sbjct: 126 LRALLTRPQAKKTPPNQYENFQQYDNNNFSAEENSVS 162


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/37 (18%), Positives = 17/37 (45%)
 Frame = +3

Query: 135 IQRILSKNYCSKVPSNPVSTVQNEDKNKICIDPSTIT 245
           ++ +L++    K P N     Q  D N    + ++++
Sbjct: 126 LRALLTRPQAKKTPPNQYENFQQYDNNNFSAEENSVS 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,633
Number of Sequences: 336
Number of extensions: 2691
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)