Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L09
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107146-1|AAI07147.1|  133|Homo sapiens 15E1.2 protein protein.       43   0.001
BC107145-1|AAI07146.1|  136|Homo sapiens hypothetical protein LO...    43   0.001
AL021546-3|CAA16496.1|  136|Homo sapiens protein ( Human DNA seq...    43   0.001

>BC107146-1|AAI07147.1|  133|Homo sapiens 15E1.2 protein protein.
          Length = 133

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = +2

Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
           R L LR D + +GNC  ++L+N+    ++YFVAP GNI
Sbjct: 82  RCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNI 119



 Score = 42.3 bits (95), Expect = 0.001
 Identities = 19/53 (35%), Positives = 35/53 (66%)
 Frame = +3

Query: 225 IDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTDNIEPLYTTLEN 383
           I  + I  LERL+LV + + + +  LE +I FA+++  ++TD +EP+ + LE+
Sbjct: 29  ITAAVIEHLERLALVDFGSREAVARLEKAIAFADRLRAVDTDGVEPMESVLED 81


>BC107145-1|AAI07146.1|  136|Homo sapiens hypothetical protein
           LOC283459 protein.
          Length = 136

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = +2

Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
           R L LR D + +GNC  ++L+N+    ++YFVAP GNI
Sbjct: 85  RCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNI 122



 Score = 42.3 bits (95), Expect = 0.001
 Identities = 19/53 (35%), Positives = 35/53 (66%)
 Frame = +3

Query: 225 IDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTDNIEPLYTTLEN 383
           I  + I  LERL+LV + + + +  LE +I FA+++  ++TD +EP+ + LE+
Sbjct: 32  ITAAVIEHLERLALVDFGSREAVARLEKAIAFADRLRAVDTDGVEPMESVLED 84


>AL021546-3|CAA16496.1|  136|Homo sapiens protein ( Human DNA
           sequence from clone XX-15E1 on chromosome 12. ).
          Length = 136

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = +2

Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
           R L LR D + +GNC  ++L+N+    ++YFVAP GNI
Sbjct: 85  RCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNI 122



 Score = 42.3 bits (95), Expect = 0.001
 Identities = 19/53 (35%), Positives = 35/53 (66%)
 Frame = +3

Query: 225 IDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTDNIEPLYTTLEN 383
           I  + I  LERL+LV + + + +  LE +I FA+++  ++TD +EP+ + LE+
Sbjct: 32  ITAAVIEHLERLALVDFGSREAVARLEKAIAFADRLRAVDTDGVEPMESVLED 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,266,339
Number of Sequences: 237096
Number of extensions: 1314666
Number of successful extensions: 2002
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)