Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L07
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.71 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.8  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   8.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 295  ARSEWRNLNIRHYKFYHIQGSL*KYTFQDYEY*RHE 188
            AR EW    + +Y  Y +  S   Y F+  E+ R E
Sbjct: 1020 AREEWNGDILGYYVGYRLANSDKPYLFETVEFGREE 1055


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 368 YAYHNLTLCFCHPWL 324
           Y ++   LCFC  WL
Sbjct: 317 YTFNLFYLCFCFYWL 331


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 368 YAYHNLTLCFCHPWL 324
           Y ++   LCFC  WL
Sbjct: 273 YTFNLFYLCFCFYWL 287


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +3

Query: 489 CPICPK*LVIPALFT*HTRLKP*HQSFS 572
           C ICPK    P L   H R     + FS
Sbjct: 10  CTICPKAFSRPWLLQGHIRTHTGEKPFS 37


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 5/14 (35%), Positives = 8/14 (57%)
 Frame = -3

Query: 283 WRNLNIRHYKFYHI 242
           W+ L   HY+ Y +
Sbjct: 141 WKQLRYEHYRLYQL 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,142
Number of Sequences: 336
Number of extensions: 3638
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)