Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L05
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.94 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.9  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.9  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   3.8  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   3.8  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   3.8  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   3.8  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   3.8  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
 Frame = -3

Query: 475 LYCNLYYLVFLT*FSMRMYW-----HYEVCLTIECQILGLLNFYLDSGVRILLAFLDLI* 311
           LYC  YY++ +T F  R  W     + E C  I+        +Y   GV +    + +  
Sbjct: 75  LYCFNYYVIVVTTFYKRRTWTRLLKNLESCAKIKKTKRYCYYYYAFFGVHLAYGVVIIYS 134

Query: 310 STSKLAR*YFVYLNRSNISIFLSHL 236
              +  +  F +L R  +  F +++
Sbjct: 135 ICVQTEKSVFDFLCRHTVEYFQNYI 159


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 358 DKNSAVQEFDTQWSD 402
           D+NS V  F+ +WSD
Sbjct: 25  DRNSIVHLFEWKWSD 39


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 358 DKNSAVQEFDTQWSD 402
           D+NS V  F+ +WSD
Sbjct: 26  DRNSIVHLFEWKWSD 40


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 358 DKNSAVQEFDTQWSD 402
           D+NS V  F+ +WSD
Sbjct: 26  DRNSIVHLFEWKWSD 40


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 422 VLAL*SLSDH*VSNS--WTAEFLSRFWSSYFI 333
           V+++  +S + +SN   W    L  FWS++FI
Sbjct: 249 VVSIFYMSAYLISNPIMWDRVMLLTFWSAFFI 280


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 595 HKSMPFYLNWYLDSTVLDLVLNAD 524
           H  M F  +W  D   LDLVLN++
Sbjct: 141 HCDMKFG-SWTYDGNQLDLVLNSE 163


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 595 HKSMPFYLNWYLDSTVLDLVLNAD 524
           H  M F  +W  D   LDLVLN++
Sbjct: 141 HCDMKFG-SWTYDGNQLDLVLNSE 163


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 595 HKSMPFYLNWYLDSTVLDLVLNAD 524
           H  M F  +W  D   LDLVLN++
Sbjct: 141 HCDMKFG-SWTYDGNQLDLVLNSE 163


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 595 HKSMPFYLNWYLDSTVLDLVLNAD 524
           H  M F  +W  D   LDLVLN++
Sbjct: 141 HCDMKFG-SWTYDGNQLDLVLNSE 163


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 595 HKSMPFYLNWYLDSTVLDLVLNAD 524
           H  M F  +W  D   LDLVLN++
Sbjct: 141 HCDMKFG-SWTYDGNQLDLVLNSE 163


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 179 ELVQILKCRMTNTIK*LHS*MREKY*DI*TI 271
           ++V   K ++TN I   H  ++EK  D  TI
Sbjct: 70  KVVSFHKLKLTNNISDKHGFLKEKAVDFLTI 100


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 502 FFFYSTFDILYCNLYYLVFLT*FSMRM 422
           ++FY  F IL C  Y+      F++ +
Sbjct: 101 YYFYYAFIILLCVYYFYYAFIIFTVHL 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,347
Number of Sequences: 336
Number of extensions: 2967
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)