Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_L05
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19G7.17 ||SPBC36B7.01|translocon subunit Sec61 homolog |Schi... 33 0.036
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 29 0.44
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.0
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 28 1.3
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 27 3.1
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 27 3.1
SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein Mc... 27 3.1
SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces p... 27 3.1
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 26 4.1
SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 26 5.4
SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 25 9.5
SPCC553.07c |mug40||DinB translesion DNA repair polymerase|Schiz... 25 9.5
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 25 9.5
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 25 9.5
>SPBC19G7.17 ||SPBC36B7.01|translocon subunit Sec61 homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 33.1 bits (72), Expect = 0.036
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -1
Query: 309 VLQNLPANILYT*IVQISQYFSRI*L*SYLIVFVILHFNICTNS 178
V QN P +LYT ++ + ++S + S+L+VF +++C NS
Sbjct: 279 VRQNFPLKLLYTSVIPLIYFYSIL---SHLLVFAYALYSLCPNS 319
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 29.5 bits (63), Expect = 0.44
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = +1
Query: 115 YRLSFKSNYLPAGIQVLNYLIGISTDIKMQDDEYYQITSQL-----DAREILRYLNDLGI 279
YR +NYL V GIS + D ITS++ + + I+ ++ G
Sbjct: 174 YRKPLTTNYLTVNTSVSGICTGISNAVDAYRDYVKNITSKMNIASDNTKPIVLFVVKGGE 233
Query: 280 QNISGQ-VLKYFISDLKKLIKYELQNRDKNSAVQEFDTQWSDRLHSASTFSS 432
+NI+ Q L+Y + + +I + + NS + + + S++L+ ++F++
Sbjct: 234 RNITDQRTLEYELLNRFHVISKRIDIAELNSLIHD---KSSNKLYMKTSFTT 282
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 349 QNRDKNSAVQEFDTQWSDRLHSASTFSSRIRSRTQDSTSCNKECQKSS 492
QN+ + ++FD + SD +AST S I S T S++ + SS
Sbjct: 104 QNQGSLAQSEQFDFEGSDSTLAASTISGGIYSSTSASSTSSSTATPSS 151
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 340 YELQN--RDKNSAVQEFDTQWSDRLHSASTFSSRIRSRTQDSTSCNKECQKSSRKKMPGL 513
YE QN K S++ ++ LH + SR+ R +D S +K+ Q +K L
Sbjct: 38 YETQNDGSKKLSSIDGSIKSFAACLHELNRLKSRVGDRIRDYASASKQVQNEYHQKSNHL 97
Query: 514 FNTYPHSAPNLRQLNPDTN 570
+ R L + N
Sbjct: 98 REKFAQVLELSRHLEDNVN 116
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 253 LRYLNDLGIQNISGQ-VLKYFISDLKKLIKYELQN 354
L+YL+ + N+ + V +YF+S+ K++ YEL N
Sbjct: 428 LKYLSFESLGNLKERYVRQYFLSNKKRIAIYELDN 462
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 238 DAREILRYLNDLGIQNISGQVLKYFISDLKKLIKYE 345
D+R ++ L D NISG +L YF++ L+++ K +
Sbjct: 19 DSRPVIEKLKD----NISGDLLNYFLNLLEEISKLD 50
>SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein
Mcp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 26.6 bits (56), Expect = 3.1
Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 7/104 (6%)
Frame = +1
Query: 301 LKYFISDLKKLIKYELQNRDKNSAVQEFDTQWSDRLHSASTFSSRIRSRTQDSTSCNK-- 474
LK L + I +E RD + + + LH+ + ++++ + CN
Sbjct: 94 LKQKSKTLDENISFEKSKRDNEGTENDANQYTLELLHAKESELKLLKTQLSNLNHCNPET 153
Query: 475 -ECQKSSRKKMPGLFNTYPHSAPNL----RQLNPDTNLSRRACS 591
E + + KK N + L R + DTN R CS
Sbjct: 154 FELKNENTKKYMEAANLWTDQIHTLIAFCRDMGADTNQIREYCS 197
>SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 454 DSTSCNKECQKSSRKKMPGLFNTYPHSAPNLR 549
DST C+ ++ +K +FN P+S P+LR
Sbjct: 245 DSTFCSTLSSLTNSEKPTYIFNFKPNSTPDLR 276
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 26.2 bits (55), Expect = 4.1
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 370 AVQEFDTQWSDRLHSASTFSSRIRSRTQDSTSCNKECQKSSRKKMPGLF--NT-YPHSAP 540
A+Q+ + + + + ST+ R+R D ++ KSS KK+ GL+ NT +P
Sbjct: 227 AIQKKKSLLIEMMETESTYVERLRHLVNDYALPLRDLAKSS-KKLLGLYELNTLFPPCLN 285
Query: 541 NLRQLN 558
L QLN
Sbjct: 286 KLIQLN 291
>SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 5.4
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +1
Query: 124 SFKSNYLPAGIQVLNYLIGISTDIKMQ 204
++K Y+ A + LN+L+G++ + +Q
Sbjct: 343 NYKMGYMGANLTYLNFLVGVTIVVMLQ 369
>SPBC29B5.02c |isp4||OPT oligopeptide transporter family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 785
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 436 FSMRMYWHYEVCLTIECQILG 374
+ R + YE+CLT+ Q++G
Sbjct: 192 YKQRFGFGYEICLTLATQLIG 212
>SPCC553.07c |mug40||DinB translesion DNA repair
polymerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 25.0 bits (52), Expect = 9.5
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +1
Query: 226 TSQLDAREILRYLNDLGIQNISGQVLKYFISDLKKLIKY---ELQNRDKNSAVQEFDTQW 396
+S L + I+ Y L +QN+S + K + IKY E Q K ++ +F
Sbjct: 383 SSNLSSPSIIEYKLRLLVQNVSENLQKRGLVTNSIAIKYKTSEFQVHTKQKSIGQFIHSE 442
Query: 397 SDRLHSA 417
SD L A
Sbjct: 443 SDLLKPA 449
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 569 LVSGFNCLRFGAECGYVLKRPGIFFLLD 486
++S F+ RFG C Y+ + ++FL++
Sbjct: 455 VLSKFSRFRFGGVCNYLAETECVWFLVE 482
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 365 IQQSKNLTLNGQTDFIVPVHSHRESGQE 448
+QQS ++ NG D + +HSH + +E
Sbjct: 698 LQQSTSVITNGSLDEVEDMHSHADYFKE 725
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,399,883
Number of Sequences: 5004
Number of extensions: 47143
Number of successful extensions: 164
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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