Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L05
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50309-6|AAG24134.1|  247|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U64840-3|AAB04961.2|  317|Caenorhabditis elegans Serpentine rece...    28   5.0  
AF067608-11|AAC17656.2|  368|Caenorhabditis elegans Hypothetical...    28   6.6  
AF043706-5|ABP57808.1|  536|Caenorhabditis elegans Hypothetical ...    28   6.6  
AF043706-4|AAU87803.1|  394|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z83106-2|CAB05494.1|  321|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>U50309-6|AAG24134.1|  247|Caenorhabditis elegans Hypothetical
           protein F58G4.3 protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +1

Query: 229 SQLDAREILRYLNDLGIQNISGQVLKYFISDLKKLIKYELQNRDK 363
           ++++  E++  LN+L  Q   G +LK  IS++ KLIK  L+   K
Sbjct: 126 NEIEIDELISKLNELVPQVKIGNLLKKLISEVSKLIKNLLKKVGK 170


>U64840-3|AAB04961.2|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 67 protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 407 SLSDH*VSNSWTAEFLSRFWSSYFIS 330
           SLS H +S+ W       FWS Y+++
Sbjct: 118 SLSAHRISSFWWPTIYEMFWSQYYVA 143


>AF067608-11|AAC17656.2|  368|Caenorhabditis elegans Hypothetical
           protein B0511.11 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1

Query: 196 KMQDDEYYQITSQLDAREILR 258
           K+ DDE+ ++TS +D +EIL+
Sbjct: 141 KLDDDEFEKMTSDVDEKEILK 161


>AF043706-5|ABP57808.1|  536|Caenorhabditis elegans Hypothetical
           protein ZC123.4b protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
 Frame = +1

Query: 100 AYNTAYRLSFKSNYLPAGIQVLNYLIGIS------TDIKMQDDEYYQITSQLDAREI--L 255
           +Y T Y+   K + L A I  LNY+  +        +IK+Q  E    T+  +A  +  L
Sbjct: 226 SYATVYKCESKLDILTADITKLNYIFRLDGSIVALKEIKLQFQEGLPFTAIREASLLRNL 285

Query: 256 RYLNDLGIQNISGQ------VLKYFISDLKKLIKYELQNRD 360
           R+ N + + +I  Q      V +Y   DL K ++  +   D
Sbjct: 286 RHANIVSLHDIFYQHHQLTFVFEYMKMDLSKYLEQNVYGLD 326


>AF043706-4|AAU87803.1|  394|Caenorhabditis elegans Hypothetical
           protein ZC123.4c protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
 Frame = +1

Query: 100 AYNTAYRLSFKSNYLPAGIQVLNYLIGIS------TDIKMQDDEYYQITSQLDAREI--L 255
           +Y T Y+   K + L A I  LNY+  +        +IK+Q  E    T+  +A  +  L
Sbjct: 70  SYATVYKCESKLDILTADITKLNYIFRLDGSIVALKEIKLQFQEGLPFTAIREASLLRNL 129

Query: 256 RYLNDLGIQNISGQ------VLKYFISDLKKLIKYELQNRD 360
           R+ N + + +I  Q      V +Y   DL K ++  +   D
Sbjct: 130 RHANIVSLHDIFYQHHQLTFVFEYMKMDLSKYLEQNVYGLD 170


>Z83106-2|CAB05494.1|  321|Caenorhabditis elegans Hypothetical
           protein F22B8.3 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 374 TAEFLSRFWSSYFISFFRSDIKYFKTCPLIFCI 276
           + +F+ R+W+     F  S +K+FK   LIFCI
Sbjct: 117 SVQFVYRYWAV----FSESKLKFFKGWRLIFCI 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,879,283
Number of Sequences: 27780
Number of extensions: 250345
Number of successful extensions: 697
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)