Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L05
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.63 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 397  SDRLHSAST--FSSRIRSRTQDSTSCNKECQKSSRKK 501
            SDRL S  T    SR  SR +DST  + +  +SSR++
Sbjct: 1391 SDRLTSPPTPLSISRAGSRDEDSTRDSTKLDRSSRER 1427


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 430 SRIRSRTQDSTSCNKECQKSSRKKMPGLFNTYPHSAPN 543
           SR  S+   S+  ++    SSR   P L  + PH   N
Sbjct: 21  SRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQDHN 58


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 98   KHITPLIDCRLSLTIYQLASK 160
            KHIT  IDC      Y+L  K
Sbjct: 957  KHITTTIDCSTQSEYYELEVK 977



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 247 EILRYLNDLGIQNISGQVLKY 309
           E+L+YL  +  + +SG   K+
Sbjct: 510 ELLKYLRKVDFEGLSGDKFKF 530


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/35 (28%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 265 NDLGIQNISGQVLKYFISDLKKLIK-YELQNRDKN 366
           NDL +++++ Q+L   ++DL +  +     N+D N
Sbjct: 389 NDLNLEHVNFQILGANVNDLIRNSRCANFDNQDNN 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,142
Number of Sequences: 438
Number of extensions: 3323
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)