Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L03
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0158 - 1103461-1104186                                           84   8e-17
08_01_0202 - 1638978-1639571                                           77   9e-15
09_04_0326 - 16694715-16695857                                         29   4.2  
11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196           28   7.4  
03_02_0737 + 10820728-10821096,10821320-10821532,10821631-108217...    28   7.4  

>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 84.2 bits (199), Expect = 8e-17
 Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
 Frame = +3

Query: 312 KRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG-L 485
           + RG  KWFN  KG+GFI+PDDG +D+FVHQS ++  GFRSL + E+VEF   ES+ G  
Sbjct: 6   RHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADGFRSLAEGEQVEFAISESEDGRT 65

Query: 486 EATRVTGPNGTDCHG 530
           +A  VTGP+G+   G
Sbjct: 66  KAVDVTGPDGSFVKG 80


>08_01_0202 - 1638978-1639571
          Length = 197

 Score = 77.4 bits (182), Expect = 9e-15
 Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +3

Query: 318 RGRCKWFNVAKGWGFITPDDGGQDVFVHQSVLQMPGFRSLGD-EEVEFECKESDKG-LEA 491
           +G  KWF+  KG+GFITPDDGG+D+FVHQS L+  G+RSL D + VEF     + G  +A
Sbjct: 7   KGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRTKA 66

Query: 492 TRVTGPNGTDCHGSDR 539
             VT P G    G  R
Sbjct: 67  VDVTAPGGGALTGGSR 82


>09_04_0326 - 16694715-16695857
          Length = 380

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +1

Query: 370 PTTAAKMFSFTRV----CYKCQGSGLLVMRK*SLSARSQIRAWKRHVLQVPMEPIVMVPI 537
           P +  K   FT V    C  C  S  L +   + S    +   +R+V+Q+P + ++  P+
Sbjct: 252 PPSNVKSVRFTEVEGELCCACFFSETLALEIWNCSGGQNLEWTRRYVIQIPPDVVMKYPV 311

Query: 538 DDPCL 552
           + P L
Sbjct: 312 ERPPL 316


>11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196
          Length = 676

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 384 QDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRVTGPNGTDCHGSD 536
           Q V V  S   +PGF    +EE E E  ++ +     R  G    D H S+
Sbjct: 225 QGVAVDGSTAYIPGFEDEDEEEGEDEAGDAGEAARGERADGEGSGDEHISE 275


>03_02_0737 +
           10820728-10821096,10821320-10821532,10821631-10821732,
           10821755-10821793,10821830-10821967,10822182-10822486,
           10822784-10822937,10823279-10823404
          Length = 481

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 363 ITPDDGGQDVFVHQSVLQMPGFRSLGDEEVEFECKESDKGLEATRVTGPNG 515
           I+P D G+    H S   +     LGD    ++ K+SD  +E  R  GP G
Sbjct: 314 ISPFDSGKRR--HTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGG 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,002,046
Number of Sequences: 37544
Number of extensions: 341713
Number of successful extensions: 658
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)