Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_K23
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +1

Query: 505 VILLKLAKNVCDCLDEKCPGCHF--PCANCNSNK 600
           +++ +L +      DE  PGCH    C+N  + +
Sbjct: 358 IVMNELDRRDDPTFDESLPGCHMVDSCSNIQTGE 391


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +1

Query: 505 VILLKLAKNVCDCLDEKCPGCHF--PCANCNSNK 600
           +++ +L +      DE  PGCH    C+N  + +
Sbjct: 365 IVMNELDRRDDPTFDESLPGCHMVDSCSNIQTGE 398


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 28  PHPHHQ 45
           PHPHHQ
Sbjct: 739 PHPHHQ 744


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 28  PHPHHQ 45
           PHPHHQ
Sbjct: 631 PHPHHQ 636


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 408 YLRNASFKKYMLQTQNNIKKIFSSARYYPNTND 310
           Y  ++ +    L   NNI+ +  S   Y +TND
Sbjct: 347 YPSHSIYPSSNLMPLNNIQNLSQSGINYKDTND 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,032
Number of Sequences: 336
Number of extensions: 2742
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)