Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_K23
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047775-1|AAH47775.1|  260|Homo sapiens chromosome 11 open read...    69   1e-11
AK096287-1|BAC04747.1|  260|Homo sapiens protein ( Homo sapiens ...    69   1e-11
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei...    30   6.2  
BC009354-1|AAH09354.2|  948|Homo sapiens RAB6IP1 protein protein.      30   6.2  
AK025499-1|BAB15155.1|  872|Homo sapiens protein ( Homo sapiens ...    30   6.2  
AF439430-1|AAL74416.1|  760|Homo sapiens thyroid peroxidase prot...    30   6.2  
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.     30   6.2  
X03072-1|CAA26874.1|  370|Homo sapiens int-1 protein protein.          30   8.2  
BT019429-1|AAV38236.1|  370|Homo sapiens wingless-type MMTV inte...    30   8.2  
BC074799-1|AAH74799.1|  370|Homo sapiens wingless-type MMTV inte...    30   8.2  
BC074798-1|AAH74798.1|  370|Homo sapiens wingless-type MMTV inte...    30   8.2  
BC051193-1|AAH51193.1|  733|Homo sapiens NFXL1 protein protein.        30   8.2  
AK131285-1|BAD18459.1|  736|Homo sapiens protein ( Homo sapiens ...    30   8.2  
AC107068-2|AAY40918.1|  733|Homo sapiens unknown protein.              30   8.2  

>BC047775-1|AAH47775.1|  260|Homo sapiens chromosome 11 open reading
           frame 46 protein.
          Length = 260

 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = +1

Query: 508 ILLKLAKNVCDCLDEKCPGCHFPCANCNSNKCGHECRINRKWMYDKIE 651
           +L+    ++CDCLDE C GC + C  C S KCG ECR +RKW+Y++IE
Sbjct: 200 LLIFSGMDLCDCLDEDCLGCFYACPACGSTKCGAECRCDRKWLYEQIE 247


>AK096287-1|BAC04747.1|  260|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38968 fis, clone NT2RI2002316. ).
          Length = 260

 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = +1

Query: 508 ILLKLAKNVCDCLDEKCPGCHFPCANCNSNKCGHECRINRKWMYDKIE 651
           +L+    ++CDCLDE C GC + C  C S KCG ECR +RKW+Y++IE
Sbjct: 200 LLIFSGMDLCDCLDEDCLGCFYACPACGSTKCGAECRCDRKWLYEQIE 247


>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
           protein.
          Length = 1287

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 605 PHLLELQFAHGKWHPGHFSSRQS 537
           PHLL+++   GK+ PG F   QS
Sbjct: 653 PHLLDMKIGQGKYEPGFFPKLQS 675


>BC009354-1|AAH09354.2|  948|Homo sapiens RAB6IP1 protein protein.
          Length = 948

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 605 PHLLELQFAHGKWHPGHFSSRQS 537
           PHLL+++   GK+ PG F   QS
Sbjct: 314 PHLLDMKIGQGKYEPGFFPKLQS 336


>AK025499-1|BAB15155.1|  872|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21846 fis, clone HEP01887. ).
          Length = 872

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 605 PHLLELQFAHGKWHPGHFSSRQS 537
           PHLL+++   GK+ PG F   QS
Sbjct: 238 PHLLDMKIGQGKYEPGFFPKLQS 260


>AF439430-1|AAL74416.1|  760|Homo sapiens thyroid peroxidase
           protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 520 LAKNVCDCLDEKCPGCHFPCANCNSNKCGHEC 615
           L K+V +C D   P CH   A C S K G +C
Sbjct: 620 LCKDVNECADGAHPPCH-ASARCRSTKGGFQC 650


>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
          Length = 1359

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 605 PHLLELQFAHGKWHPGHFSSRQS 537
           PHLL+++   GK+ PG F   QS
Sbjct: 725 PHLLDMKIGQGKYEPGFFPKLQS 747


>X03072-1|CAA26874.1|  370|Homo sapiens int-1 protein protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 535 CDCLDEKCPGCHFPCANCNSNKCGHEC 615
           C+C    C  CH  C NC   +  HEC
Sbjct: 345 CNCTFHWC--CHVSCRNCTHTRVLHEC 369


>BT019429-1|AAV38236.1|  370|Homo sapiens wingless-type MMTV
           integration site family, member 1 protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 535 CDCLDEKCPGCHFPCANCNSNKCGHEC 615
           C+C    C  CH  C NC   +  HEC
Sbjct: 345 CNCTFHWC--CHVSCRNCTHTRVLHEC 369


>BC074799-1|AAH74799.1|  370|Homo sapiens wingless-type MMTV
           integration site family, member 1 protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 535 CDCLDEKCPGCHFPCANCNSNKCGHEC 615
           C+C    C  CH  C NC   +  HEC
Sbjct: 345 CNCTFHWC--CHVSCRNCTHTRVLHEC 369


>BC074798-1|AAH74798.1|  370|Homo sapiens wingless-type MMTV
           integration site family, member 1 protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 535 CDCLDEKCPGCHFPCANCNSNKCGHEC 615
           C+C    C  CH  C NC   +  HEC
Sbjct: 345 CNCTFHWC--CHVSCRNCTHTRVLHEC 369


>BC051193-1|AAH51193.1|  733|Homo sapiens NFXL1 protein protein.
          Length = 733

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +1

Query: 541 CLDEKCPGCHFPCANCNSNKCGHEC 615
           C    CP CH PC      KCGH C
Sbjct: 570 CHFGSCPPCHQPCQKV-LEKCGHLC 593


>AK131285-1|BAD18459.1|  736|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16238 fis, clone HCASM2003018, weakly  similar
           to Homo sapiens nuclear transcription factor NFX2 (NFX2)
           mRNA. ).
          Length = 736

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +1

Query: 541 CLDEKCPGCHFPCANCNSNKCGHEC 615
           C    CP CH PC      KCGH C
Sbjct: 413 CHFGSCPPCHQPCQKV-LEKCGHLC 436


>AC107068-2|AAY40918.1|  733|Homo sapiens unknown protein.
          Length = 733

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +1

Query: 541 CLDEKCPGCHFPCANCNSNKCGHEC 615
           C    CP CH PC      KCGH C
Sbjct: 570 CHFGSCPPCHQPCQKV-LEKCGHLC 593


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,423,927
Number of Sequences: 237096
Number of extensions: 1411107
Number of successful extensions: 2724
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2724
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)