Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_K19
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 29 0.58
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 28 1.0
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.3
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 27 3.1
SPCC794.02 |wtf5||wtf element Wtf5|Schizosaccharomyces pombe|chr... 27 3.1
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 4.1
SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces pom... 26 4.1
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 25 7.2
SPBC19C2.07 |fba1||fructose-bisphosphate aldolase Fba1|Schizosac... 25 7.2
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 25 7.2
SPAC959.02 |sec17||alpha SNAP |Schizosaccharomyces pombe|chr 1||... 25 7.2
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 25 7.2
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 25 9.5
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.5
SPCC2H8.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 9.5
SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces pomb... 25 9.5
SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease |Schizosacc... 25 9.5
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 25 9.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 9.5
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 29.1 bits (62), Expect = 0.58
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 573 KVRERCRKGIPASVRPKAWLYLCGG 647
K + RKGIP R AW Y GG
Sbjct: 292 KTQRFIRKGIPPEYRGNAWFYYSGG 316
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 28.3 bits (60), Expect = 1.0
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +3
Query: 336 NKMSLQKSVKSSGDRSEQADTTSICSSVTTQPDRHGFFGGAQYSPEPKRTVSPSTILKRE 515
+++ QKS + ++ TT + TT+P+ + + P PK +S +LK
Sbjct: 122 SRIKTQKSESPIPQQVKRDGTTDAKNEETTKPENNEKDDFEEEPPLPKHKISVPDVLK-- 179
Query: 516 QKWLRMLDNWEAFMSKNYKKV 578
WL +D+WE ++KN + +
Sbjct: 180 -LWL--VDDWEN-ITKNQQLI 196
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 309 KNTEEVRKNNKMSLQKSVKSSGDRSEQADTTS 404
+NTE++ +N +S + + S+GD S Q+ TS
Sbjct: 60 ENTEDISASNVVSAEGAEASTGDASTQSPETS 91
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -1
Query: 220 PVKTAETNSPNKWHREMSSVRILQTQPHSRRQSQFANKARRRAENKHKLLIS 65
P T + +KW M + + QP +R +N +R R+ K++ S
Sbjct: 264 PATTGSSFVADKWKMPMFTSNVTSAQPSARASPVQSNSSRPRSSLDSKIINS 315
>SPCC794.02 |wtf5||wtf element Wtf5|Schizosaccharomyces pombe|chr
3|||Manual
Length = 269
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -1
Query: 646 PP--HRYNHAFGLTDAGIPFR-HLSRTFL*FLLINASQLSSIRSHFCSLFNIVLGETVLL 476
PP HR NH++G TD P L +F +L NA ++ ++ N E L
Sbjct: 54 PPNTHRENHSYGTTDNSSPLLIILLISFTSIILFNAPEVCYLKYKDAFFKNYGAAEWTLF 113
Query: 475 G 473
G
Sbjct: 114 G 114
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 561 KNYKKVRERCRKGIPASVRPKAWLYLCG 644
K + K RE + G+P + K WL G
Sbjct: 492 KRWHKFRELVKNGVPLCYKAKVWLECSG 519
>SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 646 PPHRYNHAFGLTDAGIPFRHLS 581
PP RY+HA G+T +G + S
Sbjct: 300 PPRRYSHANGVTTSGTTHSYTS 321
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 181 HREMSSVRILQTQPHSRRQSQFANKARRRAENKHKLLISLSKNS 50
H +SSVR+ TQ H R ++ +A NK + KN+
Sbjct: 527 HDTVSSVRLGHTQRHLRHVPEYLLPKGMQAVNKDIGFVPFKKNN 570
>SPBC19C2.07 |fba1||fructose-bisphosphate aldolase
Fba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 358
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 531 MLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQ 650
MLD E +N +V+E C++ +P + + + + GG+
Sbjct: 141 MLDLSEEPKKENIAQVKEYCKRAVPMKIWIEMEIGITGGE 180
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 522 WLR-MLDNW-EAFMSKNYKKVRERCRKGIPASVRPKAW 629
W R +L NW +A S Y + R+GIP+ VR + W
Sbjct: 191 WEREILRNWPDALKSSRYAGI---WRQGIPSRVRGRVW 225
>SPAC959.02 |sec17||alpha SNAP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 524 ASYARQLGSVYEQELQES 577
A+Y LG ++EQELQ++
Sbjct: 114 ANYKMDLGDIFEQELQDT 131
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1258
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 355 FCRDILLFFLTSSVFFYDRPSR 290
F +LLF + +VF+YD P++
Sbjct: 1057 FYHSLLLFLCSIAVFYYDGPNK 1078
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 495 STILKREQKWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCG 644
+ ++ R +K+ R+LD + N +R GIP+ RP W YL G
Sbjct: 186 NALVSRIKKFSRILD--APIVDLN--ALRTLAWNGIPSEHRPIVWKYLLG 231
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 410 FIGDYPTGQTRFFRRCPIQSRT*KNCLAEYD 502
F+G PT + F + + T + L EYD
Sbjct: 1018 FLGSRPTNNSSFLKNVSVDEDTAREKLMEYD 1048
>SPCC2H8.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 142 PHSRRQSQFANKARRRAENKHKLLISLS 59
P S+R S K ENKH+L+ S+S
Sbjct: 154 PQSQRISGMLKKRITMKENKHRLIQSMS 181
>SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 522 WLRMLDNWEAFMSKNYKKVRERCRK 596
W D W + + +YKKV ER K
Sbjct: 155 WDAKRDRWNGYDATDYKKVIERYEK 179
>SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = -2
Query: 285 NTPTTPPPPSCGRTNNYKTQFRP*KPPRQIHQTSGTEK 172
N P PP P+ + Q PP HQ+ T +
Sbjct: 86 NEPAKPPIPNAATKPTFPPQTEISNPPAVSHQSKNTSQ 123
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 82 VYSQHVCGPYSQTAIVFDYAAVFAVYEHSTFLCATCLVNLSRRFLRAEL 228
V S+H+C + Q + A+F YE + + LV S +FL+ L
Sbjct: 490 VLSEHLCQGFMQGYTLTGRTAIFPSYEAFMTIVVSMLVQYS-KFLKMGL 537
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 303 IDHHAQNTPTTPPPPSCGRT 244
I +H ++PT+ PPP C T
Sbjct: 203 IHNHPYSSPTSYPPPLCPAT 222
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,819,820
Number of Sequences: 5004
Number of extensions: 58612
Number of successful extensions: 225
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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