Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_K16
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.0  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   8.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 414 QKMNELKAEVDSKDQDIYHLQR 479
           QK+ +L  EVD   QD+  L+R
Sbjct: 289 QKLRDLNREVDQIKQDVEDLKR 310


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 415 CWIFACSSARSNVFFNSPC 359
           C +  CSSA+   F NS C
Sbjct: 191 CCLRTCSSAKRPKFENSSC 209


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 557 RLHY*CKFLSSLIQ*CSQNLFCIFQLSLKVIYI 459
           +L Y  +  SSL+  CS    CIF  +LKVI +
Sbjct: 87  KLRYFEEVFSSLLSCCSVIFGCIF--ALKVIEV 117


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 557 RLHY*CKFLSSLIQ*CSQNLFCIFQLSLKVIYI 459
           +L Y  +  SSL+  CS    CIF  +LKVI +
Sbjct: 87  KLRYFEEVFSSLLSCCSVIFGCIF--ALKVIEV 117


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +3

Query: 348 LLSKHGELKKTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKD 491
           LLS +GEL   L    E    +  +  ++   D + Q IY +     D
Sbjct: 422 LLSAYGELLHALSDKPELRPFEPAVTAVQPYQDQEYQPIYFVAESFDD 469


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 306 QKVSAADHAQLTDLLLSKHGELKK 377
           QKV +    +LT+ +  KHG LK+
Sbjct: 69  QKVVSFHKLKLTNNISDKHGFLKE 92


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 65  TTXHSSVFDTRNPKSRS 115
           TT  SS  ++ NP SRS
Sbjct: 221 TTSSSSALESPNPASRS 237


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 65  TTXHSSVFDTRNPKSRS 115
           TT  SS  ++ NP SRS
Sbjct: 10  TTSSSSALESPNPASRS 26


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 65  TTXHSSVFDTRNPKSRS 115
           TT  SS  ++ NP SRS
Sbjct: 10  TTSSSSALESPNPASRS 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,162
Number of Sequences: 336
Number of extensions: 2927
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)