Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_K16
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 32 0.081
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.14
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 29 0.57
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 28 1.0
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 28 1.0
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 28 1.3
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 27 2.3
SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosacchar... 27 3.1
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 3.1
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 27 3.1
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 4.0
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 26 4.0
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 26 5.3
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 26 5.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 5.3
SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit Prp31|S... 25 7.1
SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subuni... 25 7.1
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 25 9.3
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 9.3
SPBC336.06c |rnh1||ribonuclease H Rnh1|Schizosaccharomyces pombe... 25 9.3
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 31.9 bits (69), Expect = 0.081
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Frame = +3
Query: 312 VSAADHAQLTDLLLSKH--GELKKTLDLADEQ---AKIQQKMN-ELKAEVDSKDQDIYHL 473
VSAADH +L ++L + + L+K L + ++ A++Q K+N E++ ++ + ++ Y L
Sbjct: 393 VSAADHRELQEVLEATNIGDRLQKALYVLKKELLNAQLQHKINKEIEQKITQRHKE-YLL 451
Query: 474 QRQLKDAEQILATSLYQARQKLASIVKSR 560
QLK ++ L L +++ L + K R
Sbjct: 452 TEQLKQIKRELGQEL-DSKEALVTEFKKR 479
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 393 DEQAKIQQKMNELK---AEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKLASIVKSRK 563
D +A + NELK A +D KDQ++ +L+ Q+K+ +++ ++ + I+ +K
Sbjct: 466 DLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQRDILNEKK 525
Query: 564 R 566
+
Sbjct: 526 K 526
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 29.1 bits (62), Expect = 0.57
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 276 IIEVSIAPKPQKVSAADHAQLTDLLLSKHGELKKTLDLADEQAKIQQKMNELKAEVDSK 452
II I P V H +LTD LS++ E KK + ++ +QK L ++ K
Sbjct: 648 IIHHDIKPANMLVDETGHIRLTDFGLSENVEEKKEVYKLTKRMSFEQKHGNLYEQLQPK 706
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 393 DEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQ 533
DE + + ELKA + ++QD+Y+ LK + L + A +
Sbjct: 247 DESPEESEPEKELKATFNQQNQDLYNQTEALKSTNEELINQIKSAEE 293
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/81 (22%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +3
Query: 360 HGELKKTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKL 539
+ +L + +L +E+ K+Q+K+NE ++ + S+ DI R+ +D + I Q ++++
Sbjct: 637 NAQLSQLENLQNEERKLQEKVNEHESLL-SRTNDILSTLRKERDEKLIPIHEWQQLQERI 695
Query: 540 --ASIVKSRKRPVPSEGVDQI 596
+++ ++ VP + +I
Sbjct: 696 EHQTLLLRQREKVPEQFAAEI 716
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 456 QDIYHLQ-RQLKDAEQILATSLYQARQKLASIVKSRKR 566
Q+++ Q +QL DAEQ A + +++QK AS R R
Sbjct: 180 QEVFERQLKQLPDAEQPAAAPVKKSKQKSASTAPPRTR 217
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 27.1 bits (57), Expect = 2.3
Identities = 8/30 (26%), Positives = 23/30 (76%)
Frame = +3
Query: 405 KIQQKMNELKAEVDSKDQDIYHLQRQLKDA 494
++Q K++ELK++ ++KD+++ L+ ++ +
Sbjct: 55 ELQSKLSELKSKYEAKDKEVAELKGSIRQS 84
>SPAC22E12.17c |glo3||ARF GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +3
Query: 315 SAADHAQLTDLLLSK--HGELKKTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 488
SAAD D S +KK+ D D++ + + + E KD+ + + +
Sbjct: 150 SAADTTNEDDDFFSAWDKASVKKSDDNLDDKTDLASTSSSVVVESGEKDEPVVVTEEKTM 209
Query: 489 DAEQILATSLYQARQKLASIVKSRKRPV 572
+ S + K +SI +R RP+
Sbjct: 210 VSPPSRPDSTSTTKSKTSSISSARARPI 237
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/61 (24%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +3
Query: 315 SAADHAQLTDLLLSKHGELKKTLDLADEQAKIQQKMNEL---KAEVDSKDQDIYHLQRQL 485
+AA +++ +L+ + + +K +++DE K+Q+ + EL K +V +++Q+ Y+ Q
Sbjct: 185 TAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYNNLNQF 244
Query: 486 K 488
+
Sbjct: 245 Q 245
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/38 (23%), Positives = 26/38 (68%)
Frame = +3
Query: 393 DEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQIL 506
DE+A +Q+ + +++ V+ ++++ HLQ+ + +A + +
Sbjct: 34 DEEASLQRTVPLVESGVEKEEEEEKHLQQVINEAHEAI 71
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 345 LLLSKHGELKKTLDLADEQAKIQQKMNELKAEVDSKDQ 458
L +++ LKK DL DEQ + + E +DSK +
Sbjct: 99 LSMAREAMLKKDTDLRDEQLRNVRTYLEAANNIDSKSE 136
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 4.0
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Frame = +3
Query: 300 KPQKVSAADHAQLTDLLLSKHGELKKTLDLADEQ-------AKIQQKMNELKAEVDSKDQ 458
KP + + A H + + L +K E KK + E+ +Q+K EL+AE+D
Sbjct: 5 KPVRPNEALHKEALEELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELD---- 60
Query: 459 DIYHLQRQLKDAEQILATSLYQARQKLASIVK---SRKRPVP 575
+I + Q ++ ++Q L + + L VK + K+ VP
Sbjct: 61 NIRNAQAAIRSSKQTLINKVKAQDELLKKKVKELTAMKKTVP 102
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 393 DEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKLA 542
DE++ +QQK L+ E ++ ++ +LQ + + E L S+ A+ A
Sbjct: 800 DEKSTLQQKCLNLQYEYENVRIELENLQSRALELESALEQSVSDAKYSKA 849
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 467 SPSKTIERCRTNSGYITVSSSTETC 541
+P + + C+T+ YI VSS TC
Sbjct: 167 APLTSFDWCKTDPSYIVVSSLDTTC 191
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 342 DLLLSKHGELKKTLDLADEQAK-IQQKMNELKAEVDSK 452
D L K EL+K ++ + +Q ++NELKAE+ +K
Sbjct: 1284 DAKLGKIQELEKEVEKLNASLNPLQTEINELKAEIGAK 1321
>SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit
Prp31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +3
Query: 366 ELKKTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKLA 542
EL+ LD+ Q+ +E+ + + +++IY L + + I T Y+ +K A
Sbjct: 48 ELENDLDITKISDSAQKLPSEVANKFNDNNENIYQLLNSTRLRDIIEGTEKYKGTEKQA 106
>SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subunit
Rad15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 772
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 408 IQQKMNELKAEVDSKDQDIYH-LQRQLKDA 494
++QK+NE+K K QD Y L R L+DA
Sbjct: 265 LEQKVNEVKQSDSKKLQDEYQKLVRGLQDA 294
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 156 ISLYHMNWTNDPPTLRLLGFLVSK 85
IS+Y N +D P L LL L++K
Sbjct: 443 ISIYQKNHVHDSPALDLLQSLITK 466
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 501 FVLHLSIVFEGDIYLDPYYLLQL*VHSFSVGSLLVRQLGLMFFSIL 364
F+L S+VF G L P+ + + + SLL ++F SIL
Sbjct: 277 FLLRSSLVFNGVFELAPHPMYSVGYAGYYGMSLLTGSYAVLFASIL 322
>SPBC336.06c |rnh1||ribonuclease H Rnh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 264
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 452 GSRYISPSKTIERCRTNSGYITVSSST 532
GSRY S S R T+ GY SSS+
Sbjct: 55 GSRYSSSSGPYRRSTTSYGYSPYSSSS 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,511,585
Number of Sequences: 5004
Number of extensions: 47569
Number of successful extensions: 141
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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