Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_K13
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical pr...   134   4e-32
Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical pr...   134   4e-32
Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical pr...   100   2e-21
AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical ...    30   1.2  
AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    28   5.0  
AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF016676-5|AAG24100.1|  473|Caenorhabditis elegans Cytochrome p4...    28   6.7  

>Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical
           protein C35C5.3b protein.
          Length = 258

 Score =  134 bits (325), Expect = 4e-32
 Identities = 58/142 (40%), Positives = 89/142 (62%)
 Frame = +3

Query: 135 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 314
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 97  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 156

Query: 315 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLW 494
           +L G+N F       P        NK+ +CM++F L N++E  LIS+GAFE+ L N  +W
Sbjct: 157 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 216

Query: 495 SKIETGRIPQPSELFQIIDNTL 560
           SKIE+GR+P P E  Q+ID  L
Sbjct: 217 SKIESGRVPSPQEFMQLIDAQL 238


>Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical
           protein C35C5.3a protein.
          Length = 255

 Score =  134 bits (325), Expect = 4e-32
 Identities = 58/142 (40%), Positives = 89/142 (62%)
 Frame = +3

Query: 135 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 314
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 94  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 153

Query: 315 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLW 494
           +L G+N F       P        NK+ +CM++F L N++E  LIS+GAFE+ L N  +W
Sbjct: 154 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 213

Query: 495 SKIETGRIPQPSELFQIIDNTL 560
           SKIE+GR+P P E  Q+ID  L
Sbjct: 214 SKIESGRVPSPQEFMQLIDAQL 235


>Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical
           protein F28H7.4 protein.
          Length = 216

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
 Frame = +3

Query: 72  THINADSDEGSISKIGTSVG-HTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYD 248
           T +N +S    +   G S     + I YC SCGYK+ F  +    ++KYP + + G N+ 
Sbjct: 49  TVVNENSHSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFS 108

Query: 249 PPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLAN 428
           P  +   L++I+G  K+ +I  +++G N F ++    P        N+    +++F + N
Sbjct: 109 PDFWKGCLAQIVGVAKIGLIAIVITGSNPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGN 168

Query: 429 MIEGQLISSGAFEISLNNIPLWSKIETGRIPQPSELFQIIDNTLQ 563
           + E  L S+GAFEI L +  +WSKI   R+P   E   +ID  L+
Sbjct: 169 LFESTLSSTGAFEIFLGDKQIWSKISKERVPTQEEFLNLIDLQLK 213


>AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical
           protein Y50D4A.2 protein.
          Length = 192

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 239 SSNDRNLWVFLLYNSCIVFKYLFVATRITVIDIHCMPDT 123
           S N RNL +  +    + F  LF+   ++ I  +C+PDT
Sbjct: 99  SENSRNLKIDTVVKVFMQFSALFLLRHVSAITAYCIPDT 137


>AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical
           protein C36B7.6 protein.
          Length = 602

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 303 VIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANM 431
           V+  +L G  +++ +   Q  W+SW L N LY  ++MF    M
Sbjct: 452 VLFPLLVGYAVYSIIYVEQRGWYSWVL-NMLYGYLLMFGFITM 493


>Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical
           protein T13H5.8 protein.
          Length = 566

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +3

Query: 273 SRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLE---NKLYACMMMFFLANMIEGQ 443
           S+ + +  +L++  ++ G  I++ L  P  +W SW LE   N +YA   +F L  +    
Sbjct: 399 SQAMKYLSILLVPLVIGGA-IYSLLYVPHKSWRSWILETSANGVYAFGFLFMLPQLFVNY 457

Query: 444 LISSGA 461
            + S A
Sbjct: 458 KLKSVA 463


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 157 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 264
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 157 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 264
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical
           protein Y20F4.5 protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 157 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 264
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
            K03H1.5 protein.
          Length = 1385

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +3

Query: 360  PAWWSWCLENKL-YACMMMFFLANMIEGQLI 449
            P WW+WC +  L YA   M  L ++    LI
Sbjct: 1230 PGWWAWCRDRNLEYALKWMTALLSIFGISLI 1260


>AF016676-5|AAG24100.1|  473|Caenorhabditis elegans Cytochrome p450
           family protein 33C7 protein.
          Length = 473

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -2

Query: 511 PVSILDQSGMLLRDISKAPEDIS---CPSIIFAKKNIIMHAYSLFSRHQLH 368
           P   +D+SG L++     P  I    CP    A+  + +   + F+R+Q+H
Sbjct: 413 PERFIDESGKLIKVDELVPFSIGKRQCPGEGLARMELFLFIANFFNRYQVH 463


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,207
Number of Sequences: 27780
Number of extensions: 361266
Number of successful extensions: 952
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)