Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_K08
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    29   0.044
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    29   0.044
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    27   0.13 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.41 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.41 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.9  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 0.044
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 546 SSFRFFLCRLCKQRFLETKQRTIHLRV 466
           S  R + CRLCK+ F ++   T HLR+
Sbjct: 73  SGERPYRCRLCKKAFSDSSTLTKHLRI 99



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 531 FLCRLCKQRFLETKQRTIHLR 469
           F C +C +RF ++   T H+R
Sbjct: 50  FRCPVCDRRFSQSSSVTTHMR 70



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 525 CRLCKQRFLETKQRTIHLRV 466
           C+LC  RF ++     H+RV
Sbjct: 108 CKLCLLRFSQSGNLNRHMRV 127


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 28.7 bits (61), Expect = 0.044
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 546 SSFRFFLCRLCKQRFLETKQRTIHLRV 466
           S  R + CRLCK+ F ++   T HLR+
Sbjct: 329 SGERPYRCRLCKKAFSDSSTLTKHLRI 355



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 531 FLCRLCKQRFLETKQRTIHLR 469
           F C +C +RF ++   T H+R
Sbjct: 306 FRCPVCDRRFSQSSSVTTHMR 326



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 525 CRLCKQRFLETKQRTIHLRV 466
           C+LC  RF ++     H+RV
Sbjct: 364 CKLCLLRFSQSGNLNRHMRV 383


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 650 KAFEQNFNIFGITFVKYIIFVIYAQIESAG 561
           K+F  NF IF +  V  ++F  Y  I S G
Sbjct: 111 KSFRMNFAIFNLYMVLLLLFDAYLWISSVG 140


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -2

Query: 371 YVHFVSFHIHR*SLTSNVIDFDRIPLSKYILVHFCLDVVVLKCF-QVY*SE*EILIGRVV 195
           ++ FVS++I+     SN   F R  L    L +   DV+V+  F Q++    E++  + +
Sbjct: 189 FLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFLEHYEVINRQTL 248

Query: 194 D 192
           D
Sbjct: 249 D 249


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -2

Query: 371 YVHFVSFHIHR*SLTSNVIDFDRIPLSKYILVHFCLDVVVLKCF-QVY*SE*EILIGRVV 195
           ++ FVS++I+     SN   F R  L    L +   DV+V+  F Q++    E++  + +
Sbjct: 115 FLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFLEHYEVINRQTL 174

Query: 194 D 192
           D
Sbjct: 175 D 175


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 480 LYAVLFPENAVYIIDIEK 533
           L+ +L PE  VY ++IEK
Sbjct: 311 LWIILVPEEQVYHLEIEK 328


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 65  NASIRPPTCGRSC 103
           N   RPP CG++C
Sbjct: 554 NGDNRPPDCGQNC 566


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 296 LSKYILVHFCLDVVVLK 246
           +S+ +L+ FC  VVVLK
Sbjct: 176 MSQVMLIQFCAFVVVLK 192


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 296 LSKYILVHFCLDVVVLK 246
           +S+ +L+ FC  VVVLK
Sbjct: 1   MSQVMLIQFCAFVVVLK 17


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -1

Query: 531 FLCRLCKQRFLETKQRTIHLR 469
           F C +C +RF+ +     H++
Sbjct: 375 FACPICNKRFMRSDHLAKHVK 395


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 173 RPTNKFGLQPCQSRSPIHSNRPGNTSRRQ 259
           +PT  F L+   S S     RPG  ++ Q
Sbjct: 90  KPTTSFKLKDSSSDSEDERPRPGGGTKYQ 118


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +1

Query: 43  QERDHILKCFNSSSYLWSQLRHPRTAPSISMVILTQEQPYYP 168
           Q R H L C      L+S L   +    +S+    +E+P  P
Sbjct: 59  QARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDP 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,295
Number of Sequences: 336
Number of extensions: 3360
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)