Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_K01
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.8  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 510 KSVDNINVSSCKSNTGAP 457
           KS DN  VS C S  G P
Sbjct: 198 KSTDNEGVSDCDSEPGIP 215


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 525  YFPSYFILVWNVLCN 569
            +FPS   + WNVL N
Sbjct: 1116 FFPSKIRICWNVLLN 1130


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 289 QNIKRRSFAHIVERPS 242
           Q  +RR+F  I+E+P+
Sbjct: 57  QQARRRAFVKIIEQPA 72


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 407 VFLLGVNFCFFIGII 451
           +F+  + FCFF+ +I
Sbjct: 183 IFVQQIPFCFFVRVI 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,857
Number of Sequences: 336
Number of extensions: 3147
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)