Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_K01
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0585 - 26386248-26386271,26386510-26386699,26387363-263874...    29   4.2  
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733...    28   5.6  
07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-16...    27   9.8  

>04_04_0585 - 26386248-26386271,26386510-26386699,26387363-26387463,
            26387554-26387685,26387759-26387857,26387956-26388127,
            26388217-26388512,26388601-26388726,26388848-26389062,
            26389154-26389225,26389299-26389368,26389441-26389517,
            26389605-26389923,26390034-26390225,26390321-26390551,
            26390585-26390950,26392251-26392313,26392394-26392456,
            26392544-26392642,26393497-26393523,26394299-26394358,
            26395230-26396147,26396243-26397268
          Length = 1645

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 289  QNIKRRSFAHIVERPSIRYNSHNT 218
            QN+K+R F  ++  P + Y  H+T
Sbjct: 1297 QNVKKRRFDDVINSPDVEYFGHST 1320


>07_03_1632 + 28271559-28271645,28272641-28272713,28273030-28273361,
            28273455-28274791,28275451-28275848,28275963-28277644,
            28277727-28277884,28278645-28278802,28279110-28279270,
            28279826-28280014
          Length = 1524

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = -1

Query: 621  H*HLDHCVPGKLFTPNNSCIEHSTPE*SMRGNIV-----SIVKSVDNINVSSCKSNTGAP 457
            H HL +     L T  +S I+H       +G+ +       V S+ + N S+     G P
Sbjct: 1137 HNHLHYANKNNLLTDGSS-IQHRMAVLDTKGDSMVHENKRSVTSLQDRNGSTHYPPDGNP 1195

Query: 456  KSIIPIKKQKLTPRRNTNDLRTSLA 382
            +S +   K+K  P+ N +D++ S A
Sbjct: 1196 QSEVSFGKEKSHPKSNKHDMQNSKA 1220


>07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-161427,
            161530-161675,161918-161965,162054-162203,165647-165706,
            165788-165859,165960-166409,166640-166839,167239-168236,
            168676-168683,169057-169230,169341-169659,169748-169824,
            169897-169966,170040-170111,170204-170418,170540-170665,
            170751-171046,171133-171157,171163-171303,171400-171498,
            171571-171702,171793-171912
          Length = 1407

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 289  QNIKRRSFAHIVERPSIRYNSHNT 218
            QN+K+R F  +   P + Y  H+T
Sbjct: 1126 QNVKKRRFDDVTNSPDVEYLGHST 1149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,355,168
Number of Sequences: 37544
Number of extensions: 277977
Number of successful extensions: 510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)