Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_J24
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 178 2e-45
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 95 5e-20
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 94 7e-20
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 90 1e-18
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 74 8e-14
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 61 6e-10
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 5.0
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 5.0
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 28 6.6
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 28 6.6
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 178 bits (434), Expect = 2e-45
Identities = 75/157 (47%), Positives = 119/157 (75%)
Frame = +2
Query: 182 LTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARY 361
LT+VA++G DAAV+A Q++VPD L+ +VT ++ ++ +GC GMI D++ Q++RA+
Sbjct: 37 LTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQG 96
Query: 362 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDP 541
EAA+W+YK G ++P +L +++AD++Q YTQNAEMR LGC+++ I+YDDE GP VY+ DP
Sbjct: 97 EAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDP 156
Query: 542 SGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDD 652
+GYY K V+ G K + ++LEKK+KK+S+L++ +
Sbjct: 157 AGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTE 193
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +1
Query: 73 MARESSAGFDRHITIFSPEGRLYQVEYALKAIN 171
M+R SSAGFDRHITIFSPEGR+YQVEYA KAIN
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAIN 33
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 94.7 bits (225), Expect = 5e-20
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Frame = +2
Query: 173 RXGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 352
+ G SV LR D V+A + V L D ++ IGCV +GM D R V++
Sbjct: 29 KNGQPSVGLRAKDGVVLATEN-VGSVLTDDQPKVE--QISKHIGCVYSGMGPDFRILVKK 85
Query: 353 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG-PCVY 529
AR A ++ YG E+P L IA + Q YTQ+ +RP G S+++ +D G P ++
Sbjct: 86 ARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLF 145
Query: 530 KTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDL 640
+ DPSG Y ++KA A G V+ +LEK+ + +L
Sbjct: 146 QCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALEL 182
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 109 ITIFSPEGRLYQVEYALKAINQG 177
+T FSP G+L Q+EYAL A+ G
Sbjct: 9 LTTFSPSGKLMQIEYALNAVKNG 31
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 94.3 bits (224), Expect = 7e-20
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = +2
Query: 185 TSVALRGTDAAVVAAQRKVPDRLLDPVSVTH-LFALTDRIGCVMTGMIADSRSQVQRARY 361
T + + ++ VVAA+RK +LLD +T ++ L+D I C + G+ AD+ + R+
Sbjct: 33 TCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRW 92
Query: 362 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDP 541
AA+++ YG E+PV L + + + Q YTQ RP G S++ I +D G +Y++DP
Sbjct: 93 WAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDP 152
Query: 542 SGYYCSYKAVAAGAKTVDGNAYLEKKLK 625
SG Y +KA G+ L+++ K
Sbjct: 153 SGNYTGWKATCIGSNHQAAVTLLKQEYK 180
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +1
Query: 97 FDRHITIFSPEGRLYQVEYALKAIN 171
+D TIFSPEGRLYQVEYA++AI+
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIS 29
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 90.2 bits (214), Expect = 1e-18
Identities = 47/154 (30%), Positives = 79/154 (51%)
Frame = +2
Query: 173 RXGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 352
+ G T+V +RG D V+ ++K L D ++ + + D + G+ AD+R V R
Sbjct: 28 KKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDR 87
Query: 353 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYK 532
AR E +++ + V + R IA+ Q +TQ+ RP G SM++ +D + P ++K
Sbjct: 88 ARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFK 147
Query: 533 TDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRS 634
T+PSG Y Y A A G YLE++ + +
Sbjct: 148 TEPSGAYYEYVANATGRGEKPVREYLEEQYSEEN 181
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1
Query: 97 FDRHITIFSPEGRLYQVEYALKAINQG 177
+DR ITIFSP+G L+QVEYA +A+ +G
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKG 30
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 74.1 bits (174), Expect = 8e-14
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Frame = +2
Query: 173 RXGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 352
+ G TS+ ++ ++ ++AA+++ +L+ ++ + + IG G+IADSR+ V+R
Sbjct: 32 KLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVER 91
Query: 353 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN---AEM-RPLGCSMMLIAYDDEAGP 520
A+ EA N+ + Y +I V + + +A+++ + + A M RP G +M+ D E G
Sbjct: 92 AQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQE-GA 150
Query: 521 CVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKR 631
++ DPSG + KA + GA + DG E+ LK++
Sbjct: 151 KLFHLDPSGTFIDCKAKSIGAAS-DG---AEQNLKEQ 183
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 97 FDRHITIFSPEGRLYQVEYALKAINQGWVDI 189
+DR + FSPEGRL+QVEYA++A+ G I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSI 38
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/144 (25%), Positives = 64/144 (44%)
Frame = +2
Query: 185 TSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYE 364
T +A+RG + VV A + + +L + +F + D +G + G D + A E
Sbjct: 36 TMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGE 95
Query: 365 AANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPS 544
A W Y +P+ + +A+ ++T RP G ++++ + G ++ +PS
Sbjct: 96 AMKWLKDYREPMPIQNIANSVAEYIHIHTLGIS-RPFGAGAFFMSWNKQTGGRLFLVEPS 154
Query: 545 GYYCSYKAVAAGAKTVDGNAYLEK 616
G YKA A G A +EK
Sbjct: 155 GLNYEYKAWAVGKHRQAAKAEIEK 178
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 94 GFDRHITIFSPEGRLYQVEYALKAIN 171
G+D + FSP+GR++QVEYA KA++
Sbjct: 7 GYDLAASTFSPDGRIFQVEYAQKAVD 32
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 61.3 bits (142), Expect = 6e-10
Identities = 34/150 (22%), Positives = 69/150 (46%)
Frame = +2
Query: 173 RXGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 352
+ G +V ++ AV+ A ++ + L ++ + G + G+++D R +
Sbjct: 30 KQGSATVGIKSETHAVIVALKRAQNDLSSHQK--KVYEIDTHAGVSIAGLLSDGRILARY 87
Query: 353 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYK 532
+ E ++W++ Y +P+ L + Q TQ RP G +++ YD + G + +
Sbjct: 88 LQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKD-GAHIIQ 146
Query: 533 TDPSGYYCSYKAVAAGAKTVDGNAYLEKKL 622
TDPS S + GA++ YLE+ +
Sbjct: 147 TDPSAEVVSMHGTSIGARSQSARTYLERNV 176
Score = 40.7 bits (91), Expect = 9e-04
Identities = 15/27 (55%), Positives = 24/27 (88%)
Frame = +1
Query: 97 FDRHITIFSPEGRLYQVEYALKAINQG 177
+D +T++SP+GRL+QVEYA++A+ QG
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQG 32
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 607 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 518
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 607 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 518
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 607 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 518
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 607 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 518
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +1
Query: 340 SSTTSSLRGC--QLAVQVWV*DT--CAYLMQTHS*YLSSLHPKCRDET 471
++ +SSL C +V+VW +T CA +TH+ +++++HP R T
Sbjct: 90 TTDSSSLVSCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVT 137
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/88 (15%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 179 GLTSVALRGTDAAVVAAQRKVPDRLLD-PVSVTHLFALTDRIGCVMTGMIADSRSQVQRA 355
G T VA+ G + +A+ ++ +++ + +TD++ + G +D+R+ +++
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 356 RYEAANWQYKYGSEIPVHILCRRIADIS 439
+ ++ + I +L I++++
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLA 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,624,531
Number of Sequences: 27780
Number of extensions: 267332
Number of successful extensions: 689
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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