Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_J16
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255... 56 3e-08
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 54 1e-07
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 37 0.016
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 36 0.028
04_04_0122 - 22918146-22918220,22918455-22918496,22918586-229186... 31 0.60
02_04_0344 - 22171401-22171448,22171725-22171760,22171996-221720... 31 1.1
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 29 4.2
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 29 4.2
12_01_0109 + 853043-853426,853653-853787,853866-854138 28 5.6
05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948 28 7.4
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 28 7.4
09_06_0262 - 21921647-21922796,21922897-21923423 27 9.8
05_03_0077 + 8200529-8200541,8200658-8200701,8200793-8200888,820... 27 9.8
>06_01_0356 +
2557127-2557193,2557272-2557315,2557433-2557528,
2559259-2559351,2559450-2559540,2559617-2559678,
2559754-2559938,2560022-2560199,2560293-2560336,
2560440-2560635,2560728-2560745,2560955-2561005
Length = 374
Score = 55.6 bits (128), Expect = 3e-08
Identities = 45/139 (32%), Positives = 62/139 (44%)
Frame = +1
Query: 235 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 414
H + + +L PNVR+R+ LR +Q + +IE KF+ E A R IVN
Sbjct: 47 HTDVLEALSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKLYEPLYTKRYNIVN 106
Query: 415 GTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWY 594
G E D +E A +NAA EG+ D + KG+PDFW
Sbjct: 107 GVVEV----------DGGNDEP---ASENAA--EGK------------DADAKGVPDFWL 139
Query: 595 NIFRNVSMLSEMMQEHDEP 651
+ +LSE +QE DEP
Sbjct: 140 TAMKTNEVLSEEIQERDEP 158
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 54.0 bits (124), Expect = 1e-07
Identities = 43/138 (31%), Positives = 60/138 (43%)
Frame = +1
Query: 235 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 414
H + + SL P VR+R+ LR +Q + D+EAKF+ E A R IVN
Sbjct: 46 HTDVLESLEPKVRKRVEVLREIQSQHDDLEAKFFEERAALEAKYQKMYEPLYSKRYEIVN 105
Query: 415 GTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWY 594
G E D +E A T E+K++ KG+P+FW
Sbjct: 106 GVVEV----------DGVTKEA-------ADETPAEQKEE------------KGVPEFWL 136
Query: 595 NIFRNVSMLSEMMQEHDE 648
N +N +LSE +QE DE
Sbjct: 137 NAMKNHEILSEEIQERDE 154
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 553 PMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDE 648
P+ KG+PDFW N +N +L+E + E DE
Sbjct: 202 PLYSKEKGVPDFWLNAMKNNEILAEEIHESDE 233
Score = 35.5 bits (78), Expect = 0.037
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 235 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSE 342
H + + SL P+VR+R+ L +Q + ++E KF+ E
Sbjct: 153 HVDVLESLAPSVRKRVDVLMEIQSQHDELEVKFFEE 188
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 235 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 414
H + + SL P VR+R+ L +Q + ++EAKF E A R+ IV+
Sbjct: 29 HVDVLESLAPVVRKRVDVLIEIQSQHDELEAKFLEEKAALEANYQKLYGPLYSKRSEIVS 88
Query: 415 GTYE 426
G E
Sbjct: 89 GVLE 92
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 571 KGIPDFWYNIFRNVSMLSEMMQEHDE 648
KG+PDFW +N +L+E + E DE
Sbjct: 103 KGVPDFWLKAMKNNEILAEEIHESDE 128
>04_04_0122 -
22918146-22918220,22918455-22918496,22918586-22918642,
22918784-22918844,22919219-22919280,22919372-22919485,
22919565-22919636,22919824-22919874,22919990-22920112,
22921261-22921383
Length = 259
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 568 VKGIPDFWYNIFRNVSMLSEMMQEHDE 648
+K IPDFW F + ML E++ E D+
Sbjct: 72 IKQIPDFWLTAFLSHPMLGELLTEDDQ 98
>02_04_0344 -
22171401-22171448,22171725-22171760,22171996-22172056,
22173246-22173304,22173384-22173497,22173575-22173646,
22173786-22173836,22173935-22174057,22175154-22175291
Length = 233
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 568 VKGIPDFWYNIFRNVSMLSEMMQEHDE 648
++ IPDFW F + +LSE++ E D+
Sbjct: 77 IQTIPDFWLTAFLSHPLLSELLTEEDQ 103
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 400 ALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGE 522
A IV + EPN + N +D+T E+ A +NAA+T +
Sbjct: 685 AAIVTASEEPNGGDSANKLKDETMEDP---ATENAAMTNAD 722
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 342 FTVKLGLNVDKLLLKSSQGADSPTNIRG*GCHRFCMKAICDGRYHFIT 199
FT + L+ + LL ++ A+ T + G C++++CDG H +T
Sbjct: 177 FTFNISLSRENLLQVAAWDANLVTPHKRMGNAGLCLESLCDGSNHNVT 224
>12_01_0109 + 853043-853426,853653-853787,853866-854138
Length = 263
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 256 GMPSLLHEGDL*WPLSFHYGSRHFSTGVALVHHFXXXXXXLQTP 125
G+P L GD+ + L+F G+ H T VAL F Q+P
Sbjct: 129 GVPDLSEHGDV-YDLTFGLGADHPPTAVALRKEFQRIILYQQSP 171
>05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948
Length = 508
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -2
Query: 465 VITPWVETFIIIRFICAIHNKSSLFIKRLVKFFIFAFECMYFTVKLGLNVD 313
V+ PW+++F I + +H+K +L K +K A + + +K G+ +D
Sbjct: 459 VLPPWLDSFPIPNAVLCLHSKINLSGKNNMKNETLA-DILVINIKTGILMD 508
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 409 VNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDF 588
VN + +DE + ++D E E+ Q + E+K DDK ++ +D V+ I F
Sbjct: 1951 VNLDQQQKEDEEIEKQKEDEEIEK-----QKEELQTDEQKHDDKRVDFIIDTQVESIDAF 2005
Query: 589 WYNIFRNV--SMLSEMMQEHD 645
+V ML++ + +H+
Sbjct: 2006 QAEQTDSVVTEMLNDEVTQHE 2026
>09_06_0262 - 21921647-21922796,21922897-21923423
Length = 558
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 442 CLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPM 558
CL+PW D E V +AA GE D + E M
Sbjct: 300 CLSPWSDHRSSEYYNCNVYDAAKANGEASDDKRRREQGM 338
>05_03_0077 +
8200529-8200541,8200658-8200701,8200793-8200888,
8201585-8201639,8201753-8201817,8202309-8202434,
8202742-8202903
Length = 186
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 571 KGIPDFWYNIFRNVSMLSE 627
KG+PDFW N + +L+E
Sbjct: 72 KGVPDFWLNAMKKNEILAE 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,903,236
Number of Sequences: 37544
Number of extensions: 334455
Number of successful extensions: 976
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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