Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_J16
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    65   4e-11
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81123-2|CAB03365.1|  734|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin ...    27   8.7  
AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 42/137 (30%), Positives = 63/137 (45%)
 Frame = +1

Query: 241 EAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGT 420
           + + +LP NV++R+ AL+ LQ + + IE+ FY  VH                R  IV G 
Sbjct: 17  DMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGE 76

Query: 421 YEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNI 600
            EP  ++   P  +  E ++LA                 KA E   DP+ KGI DFW   
Sbjct: 77  VEPTKEQIDTPILEGLEGDQLAELY--------------KAAE--ADPSAKGIKDFWLTA 120

Query: 601 FRNVSMLSEMMQEHDEP 651
            R   +++E ++EHD P
Sbjct: 121 LRTHDLVAEAIEEHDVP 137


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 354 ECMYFTVKLGLNVDKLLLKSSQGADSPTNI 265
           EC++ + K GLNVDK+L        +PT I
Sbjct: 188 ECLHISAKSGLNVDKVLEAIIDRVPAPTAI 217


>Z81123-2|CAB03365.1|  734|Caenorhabditis elegans Hypothetical
           protein T14D7.2 protein.
          Length = 734

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = -2

Query: 477 FFFSVITPWVETFIIIRFICAIHNKSSLFIKRLVKFFI---FAFECMYFTVKLGLNVDKL 307
           + F +I P V T++++ F    + +  LFI   V+  I   FA  C   +    LN+++L
Sbjct: 648 YLFHMI-PVVLTYMLVPFPIYFNTQIPLFIHCFVQLLITYFFAIICTMVSELPALNIERL 706

Query: 306 LLKS 295
           LL S
Sbjct: 707 LLAS 710


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 448 NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMD 561
           +P RD+  EE LA+ ++  A   GE+++ +   EP  D
Sbjct: 6   DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43


>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
           protein T24A11.1b protein.
          Length = 1006

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 454 WRDDTEEEELARAVQNAAITEGEEKK 531
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 337 WRNPTDEKIIEEAVKASRI-EGEEKK 361


>Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical
           protein T24A11.1a protein.
          Length = 938

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 454 WRDDTEEEELARAVQNAAITEGEEKK 531
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 333 WRNPTDEKIIEEAVKASRI-EGEEKK 357


>AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin
           homologous protein 1 protein.
          Length = 930

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 454 WRDDTEEEELARAVQNAAITEGEEKK 531
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 337 WRNPTDEKIIEEAVKASRI-EGEEKK 361


>AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical
           protein Y51H7BM.1 protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 601 ICCTKSLGYPLHW 563
           +CC K LGYP +W
Sbjct: 52  LCCEKELGYPSNW 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.133    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,375,033
Number of Sequences: 27780
Number of extensions: 289594
Number of successful extensions: 1003
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)