Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_J12
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 37 0.012
06_03_1180 + 28218386-28218649,28218725-28219202,28219309-282196... 36 0.021
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 36 0.037
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 36 0.037
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713 33 0.20
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059... 31 0.61
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 30 1.9
10_07_0044 + 12319382-12319532,12319978-12320163,12320247-123203... 29 2.4
02_05_1148 - 34458732-34460627,34462299-34462547 29 3.2
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 28 5.6
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916... 28 5.6
02_02_0537 + 11308195-11309667 28 5.6
01_05_0645 - 23899579-23904483 28 5.6
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 27 9.9
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 VVPYSAESDCVIQETPVDV-INIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSEL 446
V P S++ D ++ +D I +++ E+ GE ADE+E + G ++ S+DNSS+L
Sbjct: 336 VKPSSSDDDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGDDSDSSSSSSDNSSDL 394
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 324 DVINIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTK 494
D + ++ E+ GE NA+E+EG G + +D+ S + DL +K
Sbjct: 345 DDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGDDSDSSSSSSDNSSDLSESGDSK 401
>06_03_1180 +
28218386-28218649,28218725-28219202,28219309-28219697,
28219785-28220426,28220466-28221368
Length = 891
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 273 VVPYSAESDCVIQETPVDV-INIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELY 449
V P S + D ++ VD I +++ E+ GE ADE+E + ++ S+DNSS+
Sbjct: 311 VKPSSDDDDDDVELEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDSSNSSSDNSSDSS 370
Query: 450 TICVDEDLGTEESTKIFNDDISVD 521
+ L + ++ DDI +D
Sbjct: 371 ESDDSKTLVIDSDEELDEDDIRID 394
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 VVPYSAESDCVIQETPVDV-INIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSE 443
V P S++ D ++ +D I +++ E+ GE ADE+E + G ++ S+DNSS+
Sbjct: 336 VKPSSSDDDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGDDSDSSSSSSDNSSD 393
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 VVPYSAESDCVIQETPVDV-INIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSE 443
V P S++ D ++ +D I +++ E+ GE ADE+E + G ++ S+DNSS+
Sbjct: 513 VKPSSSDDDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGDDSDSSSSSSDNSSD 570
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 VVPYSAESDCVIQETPVDV-INIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSE 443
V P S++ D ++ +D I +++ E+ GE ADE+E + G ++ S+DNSS+
Sbjct: 336 VKPSSSDDDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGDDSDSSSSSSDNSSD 393
>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
Length = 946
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 273 VVPYSAESDCVIQETPVD--VINIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSE 443
V P S++ D ++ VD + ++ E+ GE ADE+E + G ++ S+DNSS+
Sbjct: 336 VKPSSSDDDDDVEVEDVDEEIGEENAEEEEEGEEGADEEENDSGDDSDSSSSSSDNSSD 394
>02_05_0740 -
31404004-31404180,31404365-31405261,31405351-31405978,
31405997-31406468,31406575-31407052
Length = 883
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 273 VVPYSAESDCVIQETPVDV-INIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNS 437
V P S+ SD ++ VD I +++ E+ GE ADE+E + ++ S+DNS
Sbjct: 223 VKPSSSSSDDDVEVEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDSSNSSSDNS 278
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +3
Query: 324 DVINIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFN 503
D + ++ E+ GE NA+E+EG G + S+D+ S D + + ES +
Sbjct: 232 DDVEVEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDSS--NSSSDNSIDSSES----D 285
Query: 504 DDISVDTPTSNSD 542
D +V PT +D
Sbjct: 286 DSKTVPPPTVLAD 298
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 VVPYSAESDCVIQETPVDV-INIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSE 443
V P S++ D ++ VD I +++ E+ E ADE+E + ++ S+DNSS+
Sbjct: 324 VKPSSSDDDDDVEVEDVDEEIGEENAEEEEEEEGADEEENDSSDDSDSSNSSSDNSSD 381
>10_07_0044 +
12319382-12319532,12319978-12320163,12320247-12320396,
12320495-12320644,12320728-12321417,12321641-12322033,
12322073-12322546,12322634-12323974,12324042-12324388
Length = 1293
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 354 DAGENNADEKEGNGGKITNQPLRS-NDNSSELYTICVDEDLGTEESTKIFNDDISVDTPT 530
DA DE +GN K T + ++ + + G E+ + ND++ +DTPT
Sbjct: 152 DARRRRKDESQGNVPKATTSKFSTPTPTLGDISIVTAGDPAGREQW--VSNDEL-LDTPT 208
Query: 531 SNSDGSV 551
+ GSV
Sbjct: 209 TKGTGSV 215
>02_05_1148 - 34458732-34460627,34462299-34462547
Length = 714
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 390 NGGKITN-QPLRSNDNSSELYTICVDEDLGTEESTKIFNDDISVDTPTSNSDGSVVGCV 563
NGG++T +PL +S L+ + L + IFNDD +D+ + ++GS GC+
Sbjct: 161 NGGQMTILRPLPRARSSGRLHHMT---SLLPDTDRSIFNDDEPLDSLSEANEGSQQGCL 216
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 420 RSNDNSSELYTICVDEDLGTEESTKIFNDDISVDTPTSNS 539
+S D +L + V++ + T+++TK+F+D I + T ++S
Sbjct: 941 KSRDGQDKL-PMEVEQSMATDKNTKVFSDKILISTDPASS 979
>03_01_0009 -
89127-89924,90090-90518,90582-90716,91102-91382,
91634-91809,91899-92011,92157-92278,92375-92594
Length = 757
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 417 LRSNDNSSELYTICVDEDLGTEESTKIFNDDISVDTPTSNS 539
L S D S LY+ ++ DL + + +D++S + TSN+
Sbjct: 175 LVSKDGLSSLYSSSLESDLASSSKSDDLSDEMSSSSVTSNN 215
>02_02_0537 + 11308195-11309667
Length = 490
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 420 RSNDNSSELYTICVDEDLGTEESTKIFNDDISVDTPTSNS 539
+S D +L + V++ + T+++TK+F+D I + T ++S
Sbjct: 99 KSRDGQDKL-PMEVEQSMATDKNTKVFSDKILISTDPASS 137
>01_05_0645 - 23899579-23904483
Length = 1634
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 420 RSNDNSSELYTICVDEDLGTEESTKIFNDDISVDTPTSNS 539
+S D +L + V++ + T+++TK+F+D I + T ++S
Sbjct: 1218 KSRDGQDKL-PMEVEQSMATDKNTKVFSDKILISTDPASS 1256
>04_03_0018 -
9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 285 SAESDCVIQETPVDVINIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVD 464
SAE D +IQ V+ S+ G+ + GGK+ + N+++ E+ T +
Sbjct: 438 SAEGD-IIQNNITRVVRSSSANTTDGDRDTMNSSCYGGKVDGCIVEKNNSNKEILTDS-N 495
Query: 465 EDLGTE 482
ED G E
Sbjct: 496 EDSGIE 501
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,407,372
Number of Sequences: 37544
Number of extensions: 239676
Number of successful extensions: 632
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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