Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_J12
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical pr... 30 1.2
U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical p... 30 1.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 2.2
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical p... 29 3.8
U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 29 3.8
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 29 3.8
U58734-5|AAB52504.3| 870|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical
protein D2085.3 protein.
Length = 666
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 405 TNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDI 512
TN L +D+ SE Y+ +ED G STK+F+D++
Sbjct: 459 TNFALEEDDSESE-YSESEEEDDGVGNSTKMFHDEV 493
>U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical
protein F25B5.2 protein.
Length = 757
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 342 SSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDISVD 521
S C A K GG + +R + L + + ED+ EE+ + N I VD
Sbjct: 211 SLCNSAVRRVPTSKSEGGGTPMRRSMRMSIQKRNLSSKNM-EDVPEEEALTVSNSSIRVD 269
Query: 522 TPTSNSDGSVVG 557
P + D V G
Sbjct: 270 APIAEEDEEVFG 281
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 480 EESTKIFNDDISVDTPTSNSDGSVVGCVNRTPLVSVQFRD 599
+ ++ + DD +D N +G+ G N TPL V+ D
Sbjct: 702 QSTSNLLEDDTGIDNFVKNEEGAEAGYSNGTPLDQVEQND 741
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 342 SSCEDAGENNADEKEGNGGKITNQPLRSND 431
S +DA +++E EGNG I N + S D
Sbjct: 811 SRSDDADVESSEEDEGNGNNILNTSMESED 840
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 342 SSCEDAGENNADEKEGNGGKITNQPLRSND 431
S +DA +++E EGNG I N + S D
Sbjct: 818 SRSDDADVESSEEDEGNGNNILNTSMESED 847
>Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical
protein F59B2.11 protein.
Length = 590
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 336 IDSSCEDAGENNADEKEGNGGK--ITNQPLRSNDN 434
++ S ED NN D +G GGK ++ +++ND+
Sbjct: 37 VNGSNEDGENNNVDGNDGKGGKGALSQDAIQNNDD 71
>U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical
protein C01G8.6 protein.
Length = 344
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 414 PLRSNDNSSELYTICVDEDLGTEESTKIFNDDISVDTPTSNSDGSVVGCVNRTPLVSVQ 590
P S ++S +I EDL ST + DD DT SNSD S CV+ +S++
Sbjct: 64 PSISTESSVTFSSISDFEDLNLRCSTPLVCDD---DT-NSNSDASFASCVSEVSEMSIK 118
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 342 SSCEDAGENNADEKEGNGGKITNQPLRSND 431
S +DA +++E EGNG I N + S D
Sbjct: 811 SRSDDADVESSEEDEGNGNNILNTSMESED 840
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 342 SSCEDAGENNADEKEGNGGKITNQPLRSND 431
S +DA +++E EGNG I N + S D
Sbjct: 818 SRSDDADVESSEEDEGNGNNILNTSMESED 847
>U58734-5|AAB52504.3| 870|Caenorhabditis elegans Hypothetical
protein T27A10.6 protein.
Length = 870
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 318 PVDVINIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKI 497
P+ + N+D A EN+ +E N NQ L N +DE+ EE ++
Sbjct: 719 PISMTNLDGFSSSASENSREEDNAN----QNQHLSKMSNPE------LDEEESKEEIEEV 768
Query: 498 FNDDISVD 521
+ +I +D
Sbjct: 769 SDSEIEID 776
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,439,566
Number of Sequences: 27780
Number of extensions: 240577
Number of successful extensions: 699
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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