Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_J04
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 70 1e-12
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 61 7e-10
11_01_0767 + 6438648-6438809,6439146-6440000 59 3e-09
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 59 3e-09
11_02_0012 - 7346282-7347136,7347234-7347593 57 1e-08
11_02_0014 - 7352619-7352918,7353173-7353418 53 2e-07
11_02_0011 - 7337618-7338496,7338596-7338991 53 2e-07
04_04_0619 + 26652923-26653267,26653440-26654273 52 4e-07
11_01_0771 + 6453130-6454488 51 7e-07
01_01_1152 + 9170628-9171899 49 3e-06
11_01_0750 - 6315126-6315896,6316371-6316784 48 9e-06
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 1.8
02_01_0384 - 2781362-2782299,2782320-2782428 30 1.8
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 2.4
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 29 2.4
05_05_0373 - 24478361-24479383 29 3.2
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 4.2
05_06_0044 - 25150322-25151260 29 4.2
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 5.6
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 28 5.6
01_06_0373 - 28841462-28842850 28 7.4
11_01_0052 - 396822-396965,397332-397541,397686-397815,397956-39... 27 9.8
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +2
Query: 431 DVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKG 607
D + ++ + + F K A + IN+W E T RIKD + D++ AT AVL NA+YFKG
Sbjct: 123 DKYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFLPKDAVDRATPAVLGNALYFKG 182
Query: 608 AWSSKFDERLTSD 646
W SKFD R TSD
Sbjct: 183 DWESKFDARSTSD 195
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 61.3 bits (142), Expect = 7e-10
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +2
Query: 470 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 646
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 267
Score = 58.0 bits (134), Expect = 6e-09
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +2
Query: 494 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 646
+N WV+ T+ IK++ P S++ T VL NA+YFKGAW+ KFD T D
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTED 519
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 437 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 613
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 614 SSKFDERLTSDR 649
+ FD+ T++R
Sbjct: 102 LAPFDKSDTAER 113
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 485 AKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 646
A +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 59
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 461 DFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFD-ER 634
DF + ++ K IN WV + TN I++++ S+ TA VLVNAIYFKG WS+ F ER
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRER 175
Query: 635 LTSDR 649
T+ +
Sbjct: 176 TTTGK 180
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 488 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 643
K IN+WV + TN I +++ S+ T VLVNAIYFKG WS F T+
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTT 139
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 488 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 643
K IN WV + TN I +++ S+ TA VLVNAIYFKG WS+ F T+
Sbjct: 138 KKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTT 189
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 452 QNIDFSKNT-VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFD 628
+++DF AA +N ++ + TN R+ + ++P + S+T VL NA++FK W KF+
Sbjct: 108 RSVDFQNQANAAAAEVNRFISQATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFE 167
Query: 629 ERLTSDR 649
T R
Sbjct: 168 SYDTQRR 174
>11_01_0771 + 6453130-6454488
Length = 452
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = +2
Query: 482 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDE 631
A K IN W T I D++ P S+ TA VL NAIYFKG W F+E
Sbjct: 173 ARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNE 222
>01_01_1152 + 9170628-9171899
Length = 423
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 482 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 640
A + +N +V + T I+D++ P+S+ S+T VL NA++FKG WS F T
Sbjct: 159 ARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSAT 211
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 175 QGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 288
QG++ ++S S LA +A + GET ELL +G P
Sbjct: 57 QGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSP 94
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 431 DVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKG 607
+V+ S + DF +K A IN WV+++T + L+ ++ T VL +A+YF+G
Sbjct: 124 NVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRG 183
Query: 608 AWSSKFDERLTSDR 649
W + D R T+++
Sbjct: 184 RWLDRDDLRRTTEQ 197
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 372 IRHFKLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS 238
+RH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -3
Query: 359 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLX 180
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRRPRRG 268
Query: 179 P 177
P
Sbjct: 269 P 269
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +1
Query: 289 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 414
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 549 GLTKSLMRLLVFSSTQSLIDLAATVFFEKSMFWTSELKTSXGND 418
GLTK +RL + S++ A + F +WT E KTS G D
Sbjct: 494 GLTKETLRLDMISNSFPRYKDADIIIFNTGHWWTHE-KTSLGKD 536
>05_05_0373 - 24478361-24479383
Length = 340
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 479 VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLV 586
VA + +DW E + ++ D V PD+LSS AAV +
Sbjct: 153 VALREPHDWGESTAHAQL-DAVAPDALSSCDAAVFL 187
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 307 TEFASKSRDLRSIKGVELKMANKVYVHDG 393
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>05_06_0044 - 25150322-25151260
Length = 312
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Frame = +2
Query: 473 NTVAAKS-INDWVEENTNNRIKDL----VNPDSLSS-------ATAAVLVNAIYFKGAWS 616
N AA++ IN+W T +KD+ ++ D S + + L N++YF W
Sbjct: 32 NPAAARAEINEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWD 91
Query: 617 SKFDERLTSD 646
F LT +
Sbjct: 92 HPFFPHLTEE 101
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 347 LIDRRSRLLLANSVRIASSSGK 282
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>03_05_0725 +
27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 502 IVNRLSCDCILREINVLDVRIEDVXWKRLQNSRLVFH 392
+V L+ D ILREIN+ V++E + W +N + H
Sbjct: 546 LVKLLTADRILREINL--VKLESLLWHNDENINKITH 580
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 190 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 333
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
>11_01_0052 -
396822-396965,397332-397541,397686-397815,397956-398126,
398723-398827,398940-399613,399659-399688,399756-399932
Length = 546
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 307 TEFASKSRDLRSIKGVELKMANKVYVHDG 393
T+ S S+D++ ++ V+ + N VHDG
Sbjct: 139 TQIPSASKDIKEVRAVDEFLPNDFVVHDG 167
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,014,889
Number of Sequences: 37544
Number of extensions: 311322
Number of successful extensions: 942
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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