Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_J04
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 69 2e-12
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 69 2e-12
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 68 5e-12
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 68 5e-12
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 68 5e-12
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 68 5e-12
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 68 5e-12
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 68 5e-12
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 67 9e-12
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 67 9e-12
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 65 4e-11
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 65 4e-11
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 54 1e-07
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 54 1e-07
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 43 2e-04
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 43 2e-04
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 31 0.94
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere... 30 1.2
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 30 1.6
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 1.6
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 6.6
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 8.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 8.7
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +2
Query: 434 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 613
++N+ ++F +A++IN++V ENT IK ++NPDS+S AVL NA YFK W
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 614 SSKFDERLTSDR 649
+KF + T R
Sbjct: 178 QTKFKKESTYKR 189
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +2
Query: 434 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 613
++N+ ++F +A++IN++V ENT IK ++NPDS+S AVL NA YFK W
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 614 SSKFDERLTSDR 649
+KF + T R
Sbjct: 178 QTKFKKESTYKR 189
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +2
Query: 407 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 577
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 578 VLVNAIYFKGAWSSKFDERLT 640
VL NA+YFK W +KF + T
Sbjct: 157 VLTNALYFKADWQNKFKKDST 177
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +2
Query: 407 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 577
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 578 VLVNAIYFKGAWSSKFDERLT 640
VL NA+YFK W +KF + T
Sbjct: 157 VLTNALYFKADWQNKFKKDST 177
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +2
Query: 407 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 577
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 578 VLVNAIYFKGAWSSKFDERLT 640
VL NA+YFK W +KF + T
Sbjct: 157 VLTNALYFKADWQNKFKKDST 177
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +2
Query: 407 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 577
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 578 VLVNAIYFKGAWSSKFDERLT 640
VL NA+YFK W +KF + T
Sbjct: 157 VLTNALYFKADWQNKFKKDST 177
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +2
Query: 407 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 577
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 578 VLVNAIYFKGAWSSKFDERLT 640
VL NA+YFK W +KF + T
Sbjct: 157 VLTNALYFKADWQNKFKKDST 177
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +2
Query: 407 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 577
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 578 VLVNAIYFKGAWSSKFDERLT 640
VL NA+YFK W +KF + T
Sbjct: 157 VLTNALYFKADWQNKFKKDST 177
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = +2
Query: 434 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 613
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYFKADW 163
Query: 614 SSKFDERLTSDR 649
SKF + T+ R
Sbjct: 164 QSKFAKESTTGR 175
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 184 SVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 360
SVVLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 361 KMANKVYVHDGGKLDENF 414
K+ N+V+V+ + +++
Sbjct: 81 KIVNRVFVNQAYTIHQDY 98
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = +2
Query: 434 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 613
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYFKADW 163
Query: 614 SSKFDERLTSDR 649
SKF + T+ R
Sbjct: 164 QSKFAKESTTGR 175
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 184 SVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 360
SVVLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 361 KMANKVYVHDGGKLDENF 414
K+ N+V+V+ + +++
Sbjct: 81 KIVNRVFVNQAYTIHQDY 98
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/70 (40%), Positives = 45/70 (64%)
Frame = +2
Query: 437 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 616
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A+L+NAI+F+G W
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQGDWR 174
Query: 617 SKFDERLTSD 646
KF E S+
Sbjct: 175 RKFGEPAESN 184
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/70 (40%), Positives = 45/70 (64%)
Frame = +2
Query: 437 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 616
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A+L+NAI+F+G W
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQGDWR 174
Query: 617 SKFDERLTSD 646
KF E S+
Sbjct: 175 RKFGEPAESN 184
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +2
Query: 437 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 616
+ +D +++D + A + IN +V TN +IK++ DS+ A A +L+N+IYFK W
Sbjct: 109 YGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWD 166
Query: 617 SKFDERLTSDR 649
KFD S++
Sbjct: 167 DKFDGMSVSEQ 177
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 172 IQGKSVVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS- 342
+ +S+V S S+ L+ + G + +++ + G D+ + F+ S+++++
Sbjct: 19 VHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNG 77
Query: 343 IKGVELKMANKVYVHDGGKLDENF 414
KGVE+ +ANKVY+ G ++ F
Sbjct: 78 TKGVEVYLANKVYLKKGFTVNPTF 101
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +2
Query: 437 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 616
+ +D +++D + A + IN +V TN +IK++ DS+ A A +L+N+IYFK W
Sbjct: 109 YGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWD 166
Query: 617 SKFDERLTSDR 649
KFD S++
Sbjct: 167 DKFDGMSVSEQ 177
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 172 IQGKSVVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS- 342
+ +S+V S S+ L+ + G + +++ + G D+ + F+ S+++++
Sbjct: 19 VHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNG 77
Query: 343 IKGVELKMANKVYVHDGGKLDENF 414
KGVE+ +ANKVY+ G ++ F
Sbjct: 78 TKGVEVYLANKVYLKKGFTVNPTF 101
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 434 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 613
++N +V + D K+IN + ENT+ IK + S+ V ++A F+ W
Sbjct: 110 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 169
Query: 614 SSKFDERLTSDR 649
+KF + TS +
Sbjct: 170 QNKFHKLSTSKK 181
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 434 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 613
++N +V + D K+IN + ENT+ IK + S+ V ++A F+ W
Sbjct: 109 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 168
Query: 614 SSKFDERLTSDR 649
+KF + TS +
Sbjct: 169 QNKFHKLSTSKK 180
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 30.7 bits (66), Expect = 0.94
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 241 SDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAV 420
SD + H K G DDDAIR F D R K + N++ D GK + ++
Sbjct: 531 SDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDER--KEWIRRSENEITNEDDGKTEISYQE 588
Query: 421 VSXGRL-QFG 447
G+L QFG
Sbjct: 589 FVDGQLMQFG 598
>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical protein
K08H10.7 protein.
Length = 1020
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +2
Query: 374 KYTFMMVE--N*TRILQSFPXD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 541
KYTF++++ + TR+L+ D V N D+ ++ VA ++ W E+ ++ +
Sbjct: 838 KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894
Query: 542 VNPDS 556
VNP S
Sbjct: 895 VNPSS 899
>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
promoting factorRDE-1 protein.
Length = 1020
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +2
Query: 374 KYTFMMVE--N*TRILQSFPXD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 541
KYTF++++ + TR+L+ D V N D+ ++ VA ++ W E+ ++ +
Sbjct: 838 KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894
Query: 542 VNPDS 556
VNP S
Sbjct: 895 VNPSS 899
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 206 ENAERTTLXPWIIFHYFGKHSGCEVIVSIFEHIREICDGCH 84
E A++ T WI FH +HS I +FE IR+ CH
Sbjct: 22 EKAQKNTFTRWINFH-LEEHSSSGRIEDLFEDIRDGVLLCH 61
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 206 ENAERTTLXPWIIFHYFGKHSGCEVIVSIFEHIREICDGCH 84
E A++ T WI FH +HS I +FE IR+ CH
Sbjct: 22 EKAQKNTFTRWINFH-LEEHSSSGRIEDLFEDIRDGVLLCH 61
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 113 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 15
H ++ G H DG K+ N C GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 160 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 35
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 498 LIDLAATVFFEKSMFWTSELKTSXGNDCKILV 403
+ D+ FEK W E+KT GN +IL+
Sbjct: 91 VFDITDRKSFEKVKNWVLEIKTCLGNTAEILI 122
>Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical
protein F36F2.2 protein.
Length = 290
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 268 KALHGFHHQKLKLTEREEAAPKMPRGQRF 182
K L H ++ T EE+ P P+GQRF
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRF 191
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -3
Query: 158 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 39
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -3
Query: 158 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 39
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,765,923
Number of Sequences: 27780
Number of extensions: 270465
Number of successful extensions: 782
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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