Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_J02
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   1.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   1.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.7  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 262 SPVTSPKQAIISPR*GSSKAITAEPHVNNAFWNMF 158
           +P TSP +A +SP+  +S   +A P      +N F
Sbjct: 150 TPKTSPNEASMSPQ-STSSNNSASPKACQFLYNQF 183


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 262 SPVTSPKQAIISPR*GSSKAITAEPHVNNAFWNMF 158
           +P TSP +A +SP+  +S   +A P      +N F
Sbjct: 170 TPKTSPNEASMSPQ-STSSNNSASPKACQFLYNQF 203


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 514 WTSLYLCIT*ANSGSAMNCTGKRESAV 434
           W  LYL IT    G   NC   ++  +
Sbjct: 72  WLDLYLGITIQTLGIISNCINAKQITI 98


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 610 HIGNLVWMPSTHLTVTSPSIFVFMN 536
           H+GN   + S   +VT+ +  +F+N
Sbjct: 672 HVGNYTCLASNSASVTTYTTSLFIN 696


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,998
Number of Sequences: 336
Number of extensions: 3298
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)