Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_I03
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    35   0.058
Z47809-8|CAH10845.1|  968|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z36719-11|CAH04695.1|  968|Caenorhabditis elegans Hypothetical p...    32   0.31 
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p...    32   0.31 
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr...    32   0.31 
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.       32   0.31 
AF078784-1|AAK18967.1|  458|Caenorhabditis elegans Hypothetical ...    31   0.94 
Z79600-7|CAI79194.1|  173|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF022972-9|AAC48240.2|  333|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC091125-3|AAK27885.1|  156|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z81086-1|CAB03120.2|  258|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF039047-7|AAK95883.1|  187|Caenorhabditis elegans Hypothetical ...    28   6.7  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    27   8.8  
AF026209-11|AAB71282.1|  353|Caenorhabditis elegans Seven tm rec...    27   8.8  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 4/148 (2%)
 Frame = +3

Query: 81  KYLVLTFNVLFAMSAVVLFGASGFLLYKLFIYRHFIGVNVEYPAILLLMMAIITCSIAWI 260
           KYL+   N++  +  + L      L  K       +G       ILLL++  +   + ++
Sbjct: 10  KYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDERLATPILLLVIGSLCTLLGFL 69

Query: 261 GWRTAVSXXXXXXXXXXXXXXXXXXXEFTCFVWAMVVWDNVEIDV----KTTMTQFFEDT 428
           G   A+                    E    +    + D+  + +    +T M ++ E +
Sbjct: 70  GCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHE-S 128

Query: 429 RGADANSAESLKWDRLHVKFECCGVTGA 512
           RG ++       WD+ H  FECCGVT +
Sbjct: 129 RGVES------AWDKTHQLFECCGVTNS 150


>Z47809-8|CAH10845.1|  968|Caenorhabditis elegans Hypothetical
           protein C06C3.1d protein.
          Length = 968

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
           protein C06C3.1c protein.
          Length = 1124

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
           protein C06C3.1b protein.
          Length = 1019

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
           protein C06C3.1a protein.
          Length = 1016

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>Z36719-11|CAH04695.1|  968|Caenorhabditis elegans Hypothetical
           protein C06C3.1d protein.
          Length = 968

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
           protein C06C3.1c protein.
          Length = 1124

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
           protein C06C3.1b protein.
          Length = 1019

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
           protein C06C3.1a protein.
          Length = 1016

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
          Length = 1016

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 345 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 500
           TC V  +       ID K  M +F  + +GAD N+ ++  W  LH    CCG
Sbjct: 83  TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132


>AF078784-1|AAK18967.1|  458|Caenorhabditis elegans Hypothetical
           protein H34I24.2 protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = +1

Query: 544 FSCCGQGP--LDSLHKPYASEC 603
           F+C G GP  LDSL++PY + C
Sbjct: 272 FNCTGSGPCQLDSLNRPYCTNC 293


>Z79600-7|CAI79194.1|  173|Caenorhabditis elegans Hypothetical
           protein F59C6.12 protein.
          Length = 173

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +2

Query: 170 YIQTFYWCE-CGVSRDSIIDDGDHNMFYSMDRMEDGCIIAPDSHYHNRNPNSTS--GDHR 340
           Y  TF W   CG+ R+ +  D    ++  +D  E    I   + YH+  P+S S     R
Sbjct: 67  YEDTFPWVSLCGIERNFLRCDDTPLVYTELDSTEKELRIGQSTIYHSFQPSSLSMNSSGR 126

Query: 341 VHLLCVGYGGVGQCGDR 391
           V+  C   GG     D+
Sbjct: 127 VYHKC-PIGGKALVADK 142


>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical protein
            R10E8.6 protein.
          Length = 1696

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = -2

Query: 484  FTCNRSHFKDSAEFASAPLVSSKNCVMV---VFTSISTLSHTTIAHTKQVNSMITTSTIR 314
            F C     ++  E    PL+ +++ V V    F  I TL H  +      N  I     R
Sbjct: 1622 FICENFDMENLYELIGRPLLVTEDAVKVRKWFFKLIGTLEHVLLLRINTENGKIHVQMFR 1681

Query: 313  IPV 305
            IPV
Sbjct: 1682 IPV 1684


>AF022972-9|AAC48240.2|  333|Caenorhabditis elegans Hypothetical
           protein F10D2.10 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 359 GYGGVGQCGDRRENYHDAVLR 421
           GY G G C   R+NY DA L+
Sbjct: 106 GYPGQGHCNKERQNYTDAFLK 126


>Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical
           protein M88.7 protein.
          Length = 160

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 176 QTFYWCECGVSRDSIIDDGDHN 241
           + + WC CG S    + DG HN
Sbjct: 85  KVYAWCSCGYSGSQPLCDGSHN 106


>AC091125-3|AAK27885.1|  156|Caenorhabditis elegans Hypothetical
           protein Y67D2.3 protein.
          Length = 156

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 176 QTFYWCECGVSRDSIIDDGDH 238
           +T++WC CG+S      DG H
Sbjct: 56  KTYHWCSCGLSITQPFCDGTH 76


>Z81086-1|CAB03120.2|  258|Caenorhabditis elegans Hypothetical
           protein F53B6.1 protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 465 WDRLHVKFECCGVTG 509
           WD L   F+CCGV G
Sbjct: 148 WDALQSNFKCCGVNG 162


>AF039047-7|AAK95883.1|  187|Caenorhabditis elegans Hypothetical
           protein K11D12.7 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +1

Query: 463 NGIGYM*SSNAVGSQGPNDYATSGHVPFSCCGQGPLDSLHKPYASEC 603
           NG  +      +   GPN +  +G     CC     D +   YA EC
Sbjct: 96  NGKSHCGGMEQLKCDGPNTFCLNGPFTGICCDTRIRDKIDADYAKEC 142


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 502 SQGPNDYATSGHVPFSCCGQGPLDSLHKPYASE 600
           +QGP  Y   G+ P +  G  P  S   PYA +
Sbjct: 191 AQGPPGYGPYGYAPQASTGYPPPPSQQSPYAPQ 223


>AF026209-11|AAB71282.1|  353|Caenorhabditis elegans Seven tm
           receptor protein 262 protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +3

Query: 33  DM*TQHSTMGLSTNCWKYLVL--TFNVLFAMSAVVLFGASGFLLYKLFIYRHFIGVNVEY 206
           D+ T+ S   L  N WK  +   T + L  +  V  FG S  +L   FIYR F   N  Y
Sbjct: 62  DLFTKKSAFFLIVN-WKESIFPATMSCLMDLLFVGFFGTSMSILALHFIYRFFSVTNSRY 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,680,734
Number of Sequences: 27780
Number of extensions: 343449
Number of successful extensions: 995
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)