Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_I03
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.010
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 2.6
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 3.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 4.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 4.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 4.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 6.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 7.9
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.010
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 437 STPGVFEE-LRHGSFHVYLHIVPHHHSPHKAS 345
STPG + HG H ++H PHHH H A+
Sbjct: 410 STPGPHHHTMGHG--HSHIHATPHHHHSHAAT 439
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 223 NNRIAGYSTFTPIKCLYIKSLYNKNPLAP 137
N++ S TPIK +Y ++ KN L+P
Sbjct: 21 NDKRIYLSPRTPIKNVYKNNIETKNQLSP 49
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 3.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 460 KDSAEFASAPLVS-SKNCVMVVFTSISTLSHTTIAHTKQVNSMITTSTIRIPVMI 299
+ S E A + L++ SKN +V + + + +T VNS +T + PV I
Sbjct: 496 RQSEEEAVSLLINFSKNNTIVDISKLVNKRNNAKIYTSSVNSNLTVNQTVNPVAI 550
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/26 (23%), Positives = 17/26 (65%)
Frame = +2
Query: 455 VLKMGSVTCKVRMLWGHRGQMITRHQ 532
++K ++TC +++ W GQ++ ++
Sbjct: 238 LIKNQTITCPIKVSWRADGQIMVDYE 263
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +2
Query: 344 HLLCVGYG 367
H+LC+GYG
Sbjct: 336 HMLCIGYG 343
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 71 ELLEIFSVNF*CIIRYVSCGAVRSEWIFVVQTFY 172
+LL+ ++V+ C++ + + W F V FY
Sbjct: 443 QLLDSYAVSGFCLLFLMFFECIAISWAFGVNRFY 476
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 71 ELLEIFSVNF*CIIRYVSCGAVRSEWIFVVQTFY 172
+LL+ ++V+ C++ + + W F V FY
Sbjct: 496 QLLDSYAVSGFCLLFLMFFECIAISWAFGVNRFY 529
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +2
Query: 344 HLLCVGYG 367
H+LC+GYG
Sbjct: 304 HMLCIGYG 311
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 613 ITRRILMRRACVGNREDLGHNKRTV 539
IT+ L R V RE+L H KRT+
Sbjct: 1244 ITKYNLYTRV-VDGREELNHGKRTL 1267
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 613 ITRRILMRRACVGNREDLGHNKRTV 539
IT+ L R V RE+L H KRT+
Sbjct: 1240 ITKYNLYTRV-VDGREELNHGKRTL 1263
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +2
Query: 473 VTCKVRMLWGHRGQMITRHQATYRSLVVAKVLSIPYTSPT 592
VT + + H G+++ + A Y+S V P+ T
Sbjct: 119 VTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQT 158
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -2
Query: 604 RILMRRACVGNREDLGHN 551
R+L+R C+ +R + HN
Sbjct: 44 RVLLRGQCISSRRNGRHN 61
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,443
Number of Sequences: 438
Number of extensions: 4262
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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