Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_H13
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 270 1e-73
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 159 3e-40
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 156 3e-39
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 135 5e-33
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 114 1e-26
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 114 1e-26
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 113 2e-26
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 35 0.009
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 32 0.083
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 29 0.44
SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces... 27 1.8
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 27 3.1
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 4.1
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 26 5.4
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 25 7.2
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 25 7.2
SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting... 25 7.2
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 270 bits (662), Expect = 1e-73
Identities = 137/211 (64%), Positives = 166/211 (78%), Gaps = 1/211 (0%)
Frame = +3
Query: 15 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSV 194
+++Y+FSLTTFSP+GKLVQIEYAL AV AG TSVGIKA++GVV+ATE K S L S+
Sbjct: 2 TDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASL 61
Query: 195 NKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQ-YFLMYHEPIPTAQLVQRVATVMQEY 371
KV IT IGMVYSGMGPD+R+LV ++RK+AQ Y +Y+E PT LVQ +A+VMQE
Sbjct: 62 EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQES 121
Query: 372 TQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTXLEKRYTED 551
TQSGGVRPFGVSLL+ G +E P L+Q DPSG YFAWKATA+GK+ KT LEKRY ++
Sbjct: 122 TQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDE 181
Query: 552 LELDDAVHTAILXLKEGFEGQMTADNIXVGI 644
LELDDAVHTAIL LKE FEG++T DNI + +
Sbjct: 182 LELDDAVHTAILALKETFEGELTEDNIEIAV 212
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 159 bits (386), Expect = 3e-40
Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
Frame = +3
Query: 24 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 203
Y +L+ FSP G+L+Q+EY AV G T++ ++ + +VI E K+ L + + K+
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 204 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSG 383
M+ H+ + ++G+ D R+L+ +AR AQ + L +P+ L + VA V Q+YTQSG
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSG 123
Query: 384 GVRPFGVSLLICGWEEG--RPYLFQCDPSGAYFAWKATAMGKNFNNGKTXLEKRYTEDLE 557
GVRPFGVS LI G++ G P ++Q +P+G Y AWKATA+G+ + LEK + E L
Sbjct: 124 GVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLS 183
Query: 558 LDDAVHTAILXLKEGFEGQMTADNIXVGICD 650
D+ +H A+ L E Q + NI + I D
Sbjct: 184 RDETIHLAVSSLLEVV--QTASGNIELAIMD 212
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 156 bits (378), Expect = 3e-39
Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Frame = +3
Query: 15 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 191
S Y T FSP G+L Q+EYAL A+ G ++GI A +G+V+A E K S +L E S
Sbjct: 2 SRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEES 61
Query: 192 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEY 371
K+ I ++ +G+ D +L+ AR++ QQY ++E +P QLV+RV + Q Y
Sbjct: 62 AEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY 121
Query: 372 TQSGGVRPFGVSLLICGWEEGRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTXLEKRYTE 548
TQ GG+RPFGVS L GW+ R Y LFQ +PSG Y +W+A ++G N + ++ + + Y +
Sbjct: 122 TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKD 181
Query: 549 DLELDDAVHTAILXLKE 599
D+ LD+A A+ L +
Sbjct: 182 DINLDEASAMAVKFLSK 198
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 135 bits (327), Expect = 5e-33
Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 6/216 (2%)
Frame = +3
Query: 3 VIMASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYD 182
+ M Y + TFSP G+L Q+EYA+ A+ G T++G+K + VV+ E + S L +
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 183 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVM 362
HSV K+ I HIG SG+ D R ++ AR Q + Y EP Q + +
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 363 QEYTQSGG------VRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKT 524
+ + RPFGV+LLI G +E P L+ +PSG YF ++A A+G K+
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKS 180
Query: 525 XLEKRYTEDLELDDAVHTAILXLKEGFEGQMTADNI 632
L K + +D+ L++A + L++ E ++ + N+
Sbjct: 181 ELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNV 216
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 114 bits (274), Expect = 1e-26
Identities = 61/179 (34%), Positives = 91/179 (50%)
Frame = +3
Query: 45 FSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHI 224
FSP G+L Q EYA AV T +GIK +GV++A E S L N++ + HI
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 225 GMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGV 404
G+ +G PD + +V +AR A + Y PIP + R+ +Q +T VRPFGV
Sbjct: 74 GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGV 133
Query: 405 SLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTXLEKRYTEDLELDDAVHTA 581
+ ++ P+L+ +P+G Y+ + A GK + LEK L++ DAV A
Sbjct: 134 MSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEA 192
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 114 bits (274), Expect = 1e-26
Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 5/211 (2%)
Frame = +3
Query: 33 SLTTFSPSGKLVQIEYALAAVA-AGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEM 209
++T FSP G+L Q+EYA A AG TSVG+ N + ++ K L D +V V
Sbjct: 10 TITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFP 69
Query: 210 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGV 389
IT IG V +G D R V++AR A ++ P+P L +R+A + Q TQ +
Sbjct: 70 ITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAM 129
Query: 390 RPFGVSL-LICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTXLEKRYTED---LE 557
RP GV++ L+ +E P LF+ DP+G Y +KAT+ G LEKR+ +D
Sbjct: 130 RPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSN 189
Query: 558 LDDAVHTAILXLKEGFEGQMTADNIXVGICD 650
L D V T I L + + +G+ +
Sbjct: 190 LTDTVETGIQALMSSLSTDFKSTELQIGVVE 220
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 113 bits (273), Expect = 2e-26
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
Frame = +3
Query: 9 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 188
M +Y TT+SP G+L Q+EYAL A+ G +VG+ + V+ ++ L
Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ 60
Query: 189 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQE 368
K+ I HIG+ +G+ PD R+L ++ A ++ PIP +L+ +VA Q
Sbjct: 61 K--KLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQI 118
Query: 369 YTQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTXLEKRYT- 545
TQ G RP+GV L+ G++E P+L + PSG + T+MG + +T +E+
Sbjct: 119 NTQEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDT 178
Query: 546 -EDLELDDAVHTAILXLKEGF--EGQMTADNIXVGI 644
D ++ + +A+ L++ + ++T +N+ + +
Sbjct: 179 FPDSSREELILSALRALRDTLSKDQELTEENVSISV 214
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 35.1 bits (77), Expect = 0.009
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Frame = +3
Query: 90 AVAAGGTSVGIKASNGVVIATENKHKS--ILYDEHSVNKVEMITGHIGMVYSGMGPDYRL 263
A + G T VG+ A + +V+ + + + I+ D++ K+ +I+ +I +G D
Sbjct: 31 ATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNC-KKLHLISPNIWCAGAGTAADTEF 89
Query: 264 LVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPY 443
+ + + + L Y P ++V + + Q + G G L++ G++ P+
Sbjct: 90 VTSMISSNIELHSL-YTNRKP--RVVTALTMLKQHLFRYQG--HIGAYLVLGGYDCKGPH 144
Query: 444 LFQCDPSGAYFAWKATAMGKNFNNGKTXLEKRYTEDLELDDAVHTAILXLKEGFEGQMTA 623
LF G+ A+G + LE +Y DLE H A+ +KE E +
Sbjct: 145 LFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLER----HEAMELVKEAIEAGIFN 200
Query: 624 DNIXVGICD 650
D CD
Sbjct: 201 DLGSGSNCD 209
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 31.9 bits (69), Expect = 0.083
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 177 YDEHSVNKVEMITG----HIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQ 344
Y +H+VNK+++IT V D+ L T RK+ Y+ +Y P +L++
Sbjct: 1589 YSQHTVNKIQIITNITLDFDSFVLRTTVNDFLFLQTILRKIYNFYYALYDVPTTDVELLK 1648
Query: 345 R 347
R
Sbjct: 1649 R 1649
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 29.5 bits (63), Expect = 0.44
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 229 MPMWPVIISTLLTLCSSYSM 170
+P+WP+++S LL + SY M
Sbjct: 1508 LPLWPIVVSELLIIFKSYCM 1527
>SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 348
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3
Query: 438 PYLFQCDPSGAYFAWKATAMG---KNFNNGKTXLEKRYTEDLELDDAVHTAILXLKEGFE 608
P++ QCD + W T MG N N T Y + D+A TA+ + F+
Sbjct: 227 PFITQCDTATGDNYWAGTYMGDFVSNITNVLTNSTGHYCTTQQEDNASLTAL--TRASFD 284
Query: 609 GQMTADNIXV 638
G + + + +
Sbjct: 285 GLVNINRVVI 294
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 217 PVIISTLLTLCSSYSMLLCLFSVAITTPFDALMPTEVPPAA 95
P +++T CSS L L + P A +P + PP A
Sbjct: 265 PTLLNTYGNRCSSTDTLSSLSRLTSQDPLKASLPLQSPPLA 305
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 26.2 bits (55), Expect = 4.1
Identities = 7/30 (23%), Positives = 18/30 (60%)
Frame = -1
Query: 223 MWPVIISTLLTLCSSYSMLLCLFSVAITTP 134
+W +++ L + ++S ++C+F V + P
Sbjct: 2245 LWALLLGVLAWISRTHSWIICVFGVGLGAP 2274
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 5.4
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -1
Query: 220 WPVIISTLLTLCSSYSMLLCLFSVAITTP 134
WP+ I + T+ S+ +LC++ ++ P
Sbjct: 33 WPIRIRIINTIIISFMTMLCMYGSSVFMP 61
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 153 ENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 284
EN+ + + + N +E +T HI Y G G + T +RK
Sbjct: 21 ENRKEEVSTLQDMANDLEKLTDHIEATYIGRGVPHDHAKTGSRK 64
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 25.4 bits (53), Expect = 7.2
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 117 GIKASNGVVIATENKHKSILYDEH----SVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 284
G+K + + I+ + H +++D H ++N+ E+ IG G+GP Y T+A +
Sbjct: 103 GLKCRDRIFIS-DRAH--LVFDYHQRADALNEAELGKQSIGTTGKGIGPAYS---TKATR 156
Query: 285 MAQQYFLMYHEPIPTAQLVQRVATVMQEY 371
+ +YH A+ + VA + + Y
Sbjct: 157 SGIRVHHLYHWAEFEARYRKNVADLQKRY 185
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2
Query: 120 CRRKYHRRLRQLKHIR 73
C+R +HR+ Q++HIR
Sbjct: 9 CKRVFHRQEHQVRHIR 24
>SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting
complex subunit Apc4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 719
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 525 KFFHY*SSFPWLWLSMQNRLRRGHTGTGKDVLLPSHRSIEI 403
K F Y + W++ NR+ R +G + +L PS I I
Sbjct: 4 KSFKYPKKHKFEWINETNRVERVGSGLKRVILCPSMELIAI 44
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,764,332
Number of Sequences: 5004
Number of extensions: 57391
Number of successful extensions: 157
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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