Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_H08
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 277 7e-75
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 277 7e-75
AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical... 54 7e-08
AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical ... 31 0.93
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z93375-3|CAB07565.3| 443|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 277 bits (678), Expect = 7e-75
Identities = 120/184 (65%), Positives = 152/184 (82%)
Frame = +1
Query: 97 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 276
S+YNFK+I VP A++ D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ HD+
Sbjct: 3 SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62
Query: 277 LSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 456
L++II EFPK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY D
Sbjct: 63 LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122
Query: 457 SLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARXPXSIDPYTRTIIICGIPKCR 636
SLYRCK LKRAALGRM ++KRQ ++ YLEQVRQHL+R P SIDP TRT+I+CG P
Sbjct: 123 SLYRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLP-SIDPATRTLILCGFPNVG 181
Query: 637 KIXF 648
K F
Sbjct: 182 KSSF 185
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 277 bits (678), Expect = 7e-75
Identities = 120/184 (65%), Positives = 152/184 (82%)
Frame = +1
Query: 97 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 276
S+YNFK+I VP A++ D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ HD+
Sbjct: 3 SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62
Query: 277 LSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 456
L++II EFPK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY D
Sbjct: 63 LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122
Query: 457 SLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARXPXSIDPYTRTIIICGIPKCR 636
SLYRCK LKRAALGRM ++KRQ ++ YLEQVRQHL+R P SIDP TRT+I+CG P
Sbjct: 123 SLYRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLP-SIDPATRTLILCGFPNVG 181
Query: 637 KIXF 648
K F
Sbjct: 182 KSSF 185
>AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical
protein T07A9.9c protein.
Length = 53
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 442 LKYGDSLYRCKQLKRAALGRMATIMKRQGANLTYLE 549
+KY DSLYRCK LKRAALGRM ++KRQ ++ YL+
Sbjct: 1 MKYADSLYRCKMLKRAALGRMVKLLKRQKSSFEYLK 36
>AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical
protein Y80D3A.7 protein.
Length = 859
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = +1
Query: 169 TQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNV 348
T T + HK + + G + Q+F + R FP L + F +++ +
Sbjct: 124 TYPTTELLGHKILLANNLYGVETHPKTHRIQSFSAVILRFFLTFPNLKPMTDFEHEIVKL 183
Query: 349 LYDKDHYKLGLGQLNTARHLIDNVAKDYVRLL 444
+YD Y L GQ+ + DN+ + VR L
Sbjct: 184 VYDSGKYPLIYGQVAS-----DNLVAEEVRRL 210
>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
protein F47A4.5 protein.
Length = 1071
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 295 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDN 417
+FPK + Y D+++ D +H+ + G++ T HL+DN
Sbjct: 256 QFPKAELA---YYDIVSTDVDDEHFVIVAGKVTTDEHLMDN 293
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = +1
Query: 394 TARHLIDNVAKD-----YVRLLKYGDSLYRCKQLKRAALGRMATIMKRQGANLTYLEQVR 558
T + +++ V KD + L D +C++ K L +ATI K++ ++E
Sbjct: 276 TGKAVVETVCKDKQLCIFTFLPSIFDCQSKCRKQKIDMLNELATIFKKRSFGWVWMEGGA 335
Query: 559 QHLARXPXSIDPYTRTIIICGIPK 630
Q + I Y ++I PK
Sbjct: 336 QENVQRAFEIGDYGFPVLIAMSPK 359
>Z93375-3|CAB07565.3| 443|Caenorhabditis elegans Hypothetical
protein C38C6.5 protein.
Length = 443
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 216 KNTWVLY*KSEIYPAELPR---PTVQNYSGIPK 305
KN + Y +I A PR P + NYSGIPK
Sbjct: 196 KNLDIKYSSQQIMKAFTPRFFHPIIANYSGIPK 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,828,525
Number of Sequences: 27780
Number of extensions: 309060
Number of successful extensions: 774
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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