Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_G22
         (394 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1374 + 26117560-26117672,26117761-26117831,26118389-261184...    71   3e-13
02_01_0272 - 1816791-1816902,1817002-1817023,1817771-1817841,181...    71   4e-13
06_01_0406 + 2899807-2900133                                           57   6e-09
06_03_1410 + 29977309-29977450,29978373-29978551,29979139-299792...    27   7.1  
01_06_1118 - 34636919-34637031,34637032-34637082,34637250-346372...    26   9.4  
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308...    26   9.4  

>07_03_1374 +
           26117560-26117672,26117761-26117831,26118389-26118410,
           26118510-26118573
          Length = 89

 Score = 70.9 bits (166), Expect = 3e-13
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +1

Query: 124 FCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESAN 288
           FCNH  S E ++D         CR+C E+F TT N L+EPID+Y++W+D CE  N
Sbjct: 27  FCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWIDECERVN 81


>02_01_0272 -
           1816791-1816902,1817002-1817023,1817771-1817841,
           1817951-1818063
          Length = 105

 Score = 70.5 bits (165), Expect = 4e-13
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +1

Query: 124 FCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESAN 288
           FCNH  S E ++D         CR+CLE F T+ N L+EPID+Y++W+D CE  N
Sbjct: 27  FCNHGSSVECRIDLKNLIGEASCRICLETFSTSVNALTEPIDIYSEWIDECERVN 81


>06_01_0406 + 2899807-2900133
          Length = 108

 Score = 56.8 bits (131), Expect = 6e-09
 Identities = 23/54 (42%), Positives = 32/54 (59%)
 Frame = +1

Query: 124 FCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESA 285
           FC+H  + E  +D     A   C VC   + TT + L+EPIDVY++W+D CE A
Sbjct: 30  FCDHGGAVECSIDIKHMIAEASCFVCQARYSTTAHALTEPIDVYSEWIDQCELA 83


>06_03_1410 +
           29977309-29977450,29978373-29978551,29979139-29979222,
           29979338-29979508,29979746-29979868
          Length = 232

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 190 CRVCLEDFQTTTNVLSEP 243
           C VCL+DFQT   V S P
Sbjct: 187 CSVCLQDFQTGEKVRSLP 204


>01_06_1118 -
           34636919-34637031,34637032-34637082,34637250-34637287,
           34637344-34637468,34637552-34637714,34638910-34639083,
           34639161-34639426
          Length = 309

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/49 (20%), Positives = 25/49 (51%)
 Frame = +1

Query: 139 KSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESA 285
           + C V +D   +   ++ +VC +   T  N+ ++  +  N++ +A + A
Sbjct: 170 QQCTVPVDSRLSDVNMELKVCKQQIATYKNIYNKEKEKLNEYEEALKRA 218


>01_01_0409 -
           3084821-3084988,3085069-3085155,3085270-3085476,
           3085904-3085985,3086085-3086275,3086410-3086616,
           3086709-3086871,3087905-3087960,3088035-3088148,
           3088599-3089807
          Length = 827

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 127 CNHEKSCEVKMDRARNTARIQCR 195
           C  E +CE K  R RN  R  CR
Sbjct: 406 CYQELTCERKCQRLRNCGRHACR 428


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,403,959
Number of Sequences: 37544
Number of extensions: 118459
Number of successful extensions: 323
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)