Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_G22
         (394 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129458-1|AAM76200.1|   82|Drosophila melanogaster RE67573p pro...   111   2e-25
AE014296-2571|AAS64990.1|   82|Drosophila melanogaster CG6244-PA...    83   1e-16
U06460-1|AAC46481.1|  704|Drosophila melanogaster transcription ...    28   5.1  
AY051960-1|AAK93384.1|  704|Drosophila melanogaster LD42828p pro...    28   5.1  
AE013599-1190|AAF58737.1|  704|Drosophila melanogaster CG7704-PA...    28   5.1  

>AY129458-1|AAM76200.1|   82|Drosophila melanogaster RE67573p
           protein.
          Length = 82

 Score =  111 bits (268), Expect = 2e-25
 Identities = 47/55 (85%), Positives = 51/55 (92%)
 Frame = +1

Query: 124 FCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESAN 288
           FCNHEKSCEVKMD++RNTA+I CRVCLEDFQT  N LSEPIDVYNDWVDACE+AN
Sbjct: 28  FCNHEKSCEVKMDKSRNTAKITCRVCLEDFQTGINFLSEPIDVYNDWVDACETAN 82


>AE014296-2571|AAS64990.1|   82|Drosophila melanogaster CG6244-PA
           protein.
          Length = 82

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 33/55 (60%), Positives = 41/55 (74%)
 Frame = +1

Query: 124 FCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESAN 288
           FCNH++SCE K+D+A+   RI C VC E FQT  N L+E IDV+NDW+DACE  N
Sbjct: 28  FCNHKQSCEAKLDKAKKIGRITCTVCQEFFQTHINYLTEAIDVFNDWIDACEEEN 82


>U06460-1|AAC46481.1|  704|Drosophila melanogaster transcription
           initiation factorTFIID 85 kDa subunit protein.
          Length = 704

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 294 YLIRTFTSIHPVIIYIYWLRQNICCCLEIF 205
           YL+RTF S +   + +++ R+N+  C+ +F
Sbjct: 673 YLMRTFPSKNSPFVSLHFTRRNLLMCVGLF 702


>AY051960-1|AAK93384.1|  704|Drosophila melanogaster LD42828p
           protein.
          Length = 704

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 294 YLIRTFTSIHPVIIYIYWLRQNICCCLEIF 205
           YL+RTF S +   + +++ R+N+  C+ +F
Sbjct: 673 YLMRTFPSKNSPFVSLHFTRRNLLMCVGLF 702


>AE013599-1190|AAF58737.1|  704|Drosophila melanogaster CG7704-PA
           protein.
          Length = 704

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 294 YLIRTFTSIHPVIIYIYWLRQNICCCLEIF 205
           YL+RTF S +   + +++ R+N+  C+ +F
Sbjct: 673 YLMRTFPSKNSPFVSLHFTRRNLLMCVGLF 702


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,940,221
Number of Sequences: 53049
Number of extensions: 220817
Number of successful extensions: 659
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)