Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_G22
         (394 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034488-10|CAA22454.1|   84|Caenorhabditis elegans Hypothetical...    99   1e-21
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr...    28   2.1  
AL132860-6|CAB60526.1|  373|Caenorhabditis elegans Hypothetical ...    27   3.6  
Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    26   8.4  

>AL034488-10|CAA22454.1|   84|Caenorhabditis elegans Hypothetical
           protein Y54G11A.11 protein.
          Length = 84

 Score = 98.7 bits (235), Expect = 1e-21
 Identities = 41/55 (74%), Positives = 44/55 (80%)
 Frame = +1

Query: 124 FCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESAN 288
           FCNHE+ CEVKMDR +N   I CRVC EDFQT  N LSEPIDVY+DWVDACE AN
Sbjct: 28  FCNHERVCEVKMDREKNVGYISCRVCSEDFQTNINYLSEPIDVYSDWVDACEQAN 82


>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
           protein T01E8.3 protein.
          Length = 1299

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +1

Query: 31  QQQVWDVENQKGSHHQNERLPRHWI-SNLTVXFCNHEKSCEVKMDRARNTARIQCRVCLE 207
           +  +WD  N+K +H  +  L  +WI S+        +   E  +D       + CR C+E
Sbjct: 288 ENSLWDPTNEKVTHDMSRPLSHYWIASSHNTYLTGDQLRSESSLDCYAQALLMGCR-CIE 346


>AL132860-6|CAB60526.1|  373|Caenorhabditis elegans Hypothetical
           protein Y56A3A.9 protein.
          Length = 373

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 82  ERLPRHWISNLTVXFCNHEKSCEVKMDRARNTARIQCRVC 201
           E LPR   + L    C H + C   + R  N +   CR C
Sbjct: 282 EELPRETRTELARLRCGHSRLCGSYVARIENRSISPCRKC 321


>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 28  NQQQVWDVENQKGSHHQNERLP 93
           NQ  VW+V  Q  SH   +R+P
Sbjct: 114 NQDYVWNVTPQSKSHKMEKRVP 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,824,000
Number of Sequences: 27780
Number of extensions: 120683
Number of successful extensions: 362
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)