Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_G05
(438 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative... 77 2e-13
UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62; Fungi/... 75 5e-13
UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1; B... 75 7e-13
UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55; Euka... 74 1e-12
UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2; Cryptos... 74 2e-12
UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n... 70 2e-11
UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5; ... 69 3e-11
UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3; ... 68 8e-11
UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n... 66 4e-10
UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29; Euka... 65 7e-10
UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, wh... 57 1e-07
UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=... 53 3e-06
UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1; A... 53 3e-06
UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1; Encepha... 52 4e-06
UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3; ... 48 1e-04
UniRef50_Q6LZK0 Cluster: Ribosomal protein L34e; n=5; Methanococ... 44 0.002
UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4; Thermo... 41 0.013
UniRef50_Q8TZB2 Cluster: 50S ribosomal protein L34e; n=3; Archae... 39 0.041
UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1; ... 39 0.054
UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3; Methan... 38 0.12
UniRef50_Q8ZTJ2 Cluster: 50S ribosomal protein L34e; n=3; Pyroba... 35 0.66
UniRef50_Q3LW25 Cluster: Ribosomal protein L34; n=1; Bigelowiell... 33 2.0
UniRef50_Q74NH0 Cluster: NEQ297; n=1; Nanoarchaeum equitans|Rep:... 33 2.7
UniRef50_Q975K6 Cluster: 50S ribosomal protein L34e; n=2; Sulfol... 33 2.7
UniRef50_UPI0000E4799B Cluster: PREDICTED: similar to zinc trans... 33 3.5
UniRef50_A1RXV1 Cluster: Ribosomal protein L34e; n=1; Thermofilu... 33 3.5
UniRef50_Q9UZJ7 Cluster: 50S ribosomal protein L34e; n=8; Archae... 33 3.5
UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;... 32 6.2
>UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative;
n=10; Eukaryota|Rep: Ribosomal protein L34 protein,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 192
Score = 77.0 bits (181), Expect = 2e-13
Identities = 38/59 (64%), Positives = 40/59 (67%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 342
CG C KL GI RP E S++ KKTV R YGG C CVK RIVRAFLIEEQKIVK
Sbjct: 120 CGDCGIKLPGIPALRPREYSQISRPKKTVSRAYGGSRCAGCVKDRIVRAFLIEEQKIVK 178
Score = 43.2 bits (97), Expect = 0.002
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 39 VQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRXWSVQEQTPWYPA 203
+ R F R YNT+SN+ RI++TPGG L Y ++KK P+ + P PA
Sbjct: 81 IDRFLFYR---YNTRSNKVRIIKTPGGELRYLHIKKKGTAPKCGDCGIKLPGIPA 132
>UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62;
Fungi/Metazoa group|Rep: 60S ribosomal protein L34 -
Homo sapiens (Human)
Length = 117
Score = 75.4 bits (177), Expect = 5e-13
Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 321
K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 322 EEQKI-VKVL 348
EEQKI VKVL
Sbjct: 98 EEQKIVVKVL 107
Score = 64.9 bits (151), Expect = 7e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L34, putative -
Babesia bovis
Length = 157
Score = 74.9 bits (176), Expect = 7e-13
Identities = 35/59 (59%), Positives = 39/59 (66%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 342
CG CK KL GI RP L R++ V R YGGV CHKCVK RI+RAFL EEQK +K
Sbjct: 44 CGDCKCKLAGIPALRPHLYRNLKKRERRVSRAYGGVRCHKCVKDRIIRAFLKEEQKALK 102
Score = 48.4 bits (110), Expect = 7e-05
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
MVQR+ RR YNT+SN++R V+TPGGRLV Q K + P+
Sbjct: 1 MVQRVVLRRHCRYNTRSNKQRKVKTPGGRLVVQRRVKVAQGPK 43
>UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55;
Eukaryota|Rep: 60S ribosomal protein L34-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 121
Score = 74.1 bits (174), Expect = 1e-12
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 342
CG C S L+GI RP + + + KTV R YGG C CVK+RI+RAFLIEEQKIVK
Sbjct: 44 CGDCGSALQGISTLRPRQYATVSKTHKTVSRAYGGSRCANCVKERIIRAFLIEEQKIVK 102
Score = 52.0 bits (119), Expect = 5e-06
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
M QR+TFRRR YNT+SN+ ++V+TPGG L Q+VKK P+
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPK 43
>UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L34 -
Cryptosporidium parvum Iowa II
Length = 138
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 342
CG CK L GI P E L R++TV R YGG C CV+QRI+RAFL+EEQK+VK
Sbjct: 47 CGDCKKPLAGIPACAPYEMKHLKKRERTVARAYGGTKCPTCVRQRILRAFLLEEQKVVK 105
Score = 48.0 bits (109), Expect = 9e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +3
Query: 33 KMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRXWSVQEQTPWYPA 203
KM R+T+RR+ YNT SN+ R+V+TPGGR + Q + K P+ ++ PA
Sbjct: 3 KMSPRVTYRRKCRYNTPSNRVRVVKTPGGRNLIQNIGKVYSRPKCGDCKKPLAGIPA 59
>UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n=4;
Eukaryota|Rep: 60S ribosomal protein L34a, putative -
Theileria parva
Length = 138
Score = 70.1 bits (164), Expect = 2e-11
Identities = 32/59 (54%), Positives = 36/59 (61%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 342
CG CK L G+ RP L R +TV R YGG CH CVK RI+RAFL EEQK V+
Sbjct: 44 CGDCKRTLAGVSAVRPFLYKNLKRRNRTVSRPYGGSRCHNCVKDRIIRAFLKEEQKCVR 102
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
MVQR+ +RRR Y T SN + VRTPG RLV +KK K PR
Sbjct: 1 MVQRVHYRRRNKYKTPSNVVKRVRTPGARLVLHNLKKVGKRPR 43
>UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L34e, putative -
Plasmodium yoelii yoelii
Length = 164
Score = 69.3 bits (162), Expect = 3e-11
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 342
C CK+ ++G++ RPA+ R + + V R YGG +C KC K+RI+RAFL EEQK V+
Sbjct: 44 CADCKNPIQGVKALRPADNQRARKKDRKVSRAYGGSICAKCXKERIMRAFLFEEQKCVR 102
Score = 46.0 bits (104), Expect = 4e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
M QR+ +R+ YNTKSN+ R +RTPGG+L +KK P+
Sbjct: 1 MAQRVHYRKHNHYNTKSNKVRPIRTPGGKLTIHVIKKKAGKPK 43
>UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L34 - Entamoeba histolytica HM-1:IMSS
Length = 137
Score = 68.1 bits (159), Expect = 8e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 345
CG C L GI+ RP + L K+TV R YGGV CHKCV+++I+RAFLI E ++K+
Sbjct: 44 CGDCGCVLAGIRHIRPHQYGWLGKSKRTVTRAYGGVRCHKCVQKKILRAFLINEHNLIKL 103
Score = 41.1 bits (92), Expect = 0.010
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 146
M R+T+ R+ SYNTKSN RIV+T GG + Q+ +K
Sbjct: 1 MAVRVTYVRKHSYNTKSNGIRIVKTAGGNMTVQHRQK 37
>UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L34e - Antonospora locustae (Nosema locustae)
Length = 113
Score = 65.7 bits (153), Expect = 4e-10
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +1
Query: 142 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 321
K P R C +C+SKLRGI RPA +RL ++TV R YGG LC C++ RI+ AFL
Sbjct: 36 KKPGRVPKCVKCRSKLRGIDICRPAAFARLRKSQRTVARTYGGNLCGSCLENRILDAFLS 95
Query: 322 EEQKIV 339
E++++
Sbjct: 96 AEEQLL 101
Score = 52.0 bits (119), Expect = 5e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
MVQ LT R R +YN SNQ++I RTPG R VY KKP ++P+
Sbjct: 1 MVQHLTHRGRRTYNNASNQKKIRRTPGNRRVYIPKKKPGRVPK 43
>UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29;
Eukaryota|Rep: 60S ribosomal protein L34-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 120
Score = 64.9 bits (151), Expect = 7e-10
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = +1
Query: 151 RRSQG--CGQCKSKLRGIQPARPAE--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFL 318
+R+ G C +++GI RP+E RSRL ++TV R YGGVL V++RI+RAFL
Sbjct: 37 KRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFL 96
Query: 319 IEEQKIVK 342
+EEQKIVK
Sbjct: 97 VEEQKIVK 104
Score = 59.3 bits (137), Expect = 4e-08
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
MVQRL +R R SY TKSNQ RIV+TPGG+LVYQ KK P+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPK 43
>UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 108
Score = 57.2 bits (132), Expect = 1e-07
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +1
Query: 187 LRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 342
L G++ RP + +L R++TV R YGGVL +K RI+RAFL+EE KIVK
Sbjct: 53 LNGLKRIRPTKLKQLARRQRTVSRPYGGVLSAGALKNRIIRAFLVEEVKIVK 104
Score = 49.2 bits (112), Expect = 4e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 45 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 146
R+T+RRR SYNT+SN+ R V+TPGG +V QY K
Sbjct: 4 RITYRRRTSYNTRSNKIRKVKTPGGNVVVQYPNK 37
>UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L34,
putative - Leishmania major
Length = 168
Score = 52.8 bits (121), Expect = 3e-06
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +1
Query: 136 M*KSPRRSQGCGQC----KSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI 303
M K +RSQG +L G + R + +K+V R YGGVL H V+ R+
Sbjct: 33 MQKRAKRSQGIHTPWVLGHKRLGGTKALRHIDARLASRHEKSVSRAYGGVLSHDQVRDRV 92
Query: 304 VRAFLIEEQKIVK 342
VRAFL+EEQ+IVK
Sbjct: 93 VRAFLVEEQRIVK 105
Score = 39.5 bits (88), Expect = 0.031
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 45 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQ-YVKKPKKIPRXW 170
R+ +RRR+ Y T+ N+ ++VRTPG +LV Q K+ + I W
Sbjct: 5 RVQYRRRMHYATRGNRMKMVRTPGNKLVMQKRAKRSQGIHTPW 47
>UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1;
Aedes aegypti|Rep: Ribosomal protein L34, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 123
Score = 52.8 bits (121), Expect = 3e-06
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +1
Query: 142 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 321
K R C QCK + Q + +C KTV R +GGV+CH+ +RI+RAFLI
Sbjct: 34 KKQRIVSKCCQCKGEAVRNQAS---VHVCMCRCLKTVIRTFGGVICHR---ERIIRAFLI 87
Query: 322 EEQKIVKVL 348
+EQK+VKVL
Sbjct: 88 DEQKVVKVL 96
>UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L34
- Encephalitozoon cuniculi
Length = 110
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +1
Query: 142 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 321
K + C +C + L I RPAE SR + V R YG C +CV+++I+ AFL
Sbjct: 35 KKHSKKHRCHECNAILGSIARMRPAEFSRQKVSARRVNRPYGATTCGRCVREKIISAFLG 94
Query: 322 EEQKIV 339
E++IV
Sbjct: 95 NEERIV 100
Score = 38.3 bits (85), Expect = 0.071
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 39 VQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKK 155
++ + + +Y T+SN+RR VRTP G+LV + VKK K
Sbjct: 1 MKNVLIHKGATYKTRSNRRRKVRTPSGKLVNRRVKKHSK 39
>UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein L34e,
putative - Trichomonas vaginalis G3
Length = 116
Score = 47.6 bits (108), Expect = 1e-04
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 106 GHRVAAWFISM*KSPRRSQG--CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLC 279
G+++ A +I+ +R G C + ++ GI+ + E R+ ++TV R YGGV C
Sbjct: 28 GNKLVAHYIA-----KRQNGPHCAETGKRINGIKCVKTCELRRMKKNQRTVSRPYGGVYC 82
Query: 280 HKCVKQRIVRAFLIEE 327
VK RI+ AF+ EE
Sbjct: 83 GAVVKDRIINAFMEEE 98
Score = 35.5 bits (78), Expect = 0.50
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 45 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIP 161
R T RR L ++T N+ VRTPG +LV Y+ K + P
Sbjct: 5 RYTLRRSLGFHTIRNRVAPVRTPGNKLVAHYIAKRQNGP 43
>UniRef50_Q6LZK0 Cluster: Ribosomal protein L34e; n=5;
Methanococcus|Rep: Ribosomal protein L34e -
Methanococcus maripaludis
Length = 89
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIV 306
CG C + L G+ R E ++L +K +R +GG LC KCVK+ +V
Sbjct: 37 CGACGALLNGVPRGRAVEITKLAKTEKRPERPFGGNLCPKCVKKMMV 83
>UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L34e - Aeropyrum
pernix
Length = 95
Score = 40.7 bits (91), Expect = 0.013
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRA 312
C +C L G+ RP RL K +R YGGVLC C+ + I A
Sbjct: 42 CARCGRPLGGVPRGRPPRVRRLSKTAKRPERPYGGVLCSTCLAEMIFEA 90
>UniRef50_Q8TZB2 Cluster: 50S ribosomal protein L34e; n=3;
Archaea|Rep: 50S ribosomal protein L34e - Methanopyrus
kandleri
Length = 113
Score = 39.1 bits (87), Expect = 0.041
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI 303
CG C +L G+ R E +K R YGGVLC +C ++ I
Sbjct: 37 CGACGRRLNGVMRGRNVELKNAPKTQKRPNRPYGGVLCPECARKLI 82
>UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 97
Score = 38.7 bits (86), Expect = 0.054
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 315
CG L+GI +RL + KKTV+R YGG L V+ IVRAF
Sbjct: 48 CGDTGVPLQGIPALVLVSLTRLSHNKKTVQRAYGGCLSANAVRS-IVRAF 96
>UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L34e -
Methanobacterium thermoautotrophicum
Length = 88
Score = 37.5 bits (83), Expect = 0.12
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQ 297
C C L G+ RP E +L KK R YGG C C ++
Sbjct: 37 CAGCGKPLHGVPRGRPYEIRKLSKSKKRPNRPYGGYYCSSCARK 80
>UniRef50_Q8ZTJ2 Cluster: 50S ribosomal protein L34e; n=3;
Pyrobaculum|Rep: 50S ribosomal protein L34e -
Pyrobaculum aerophilum
Length = 84
Score = 35.1 bits (77), Expect = 0.66
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 63 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
R +Y ++S +R V+TPGGR V Y K+ K +P+
Sbjct: 3 RPAYRSRSVRRIKVKTPGGRTVIHYEKRAKGVPK 36
>UniRef50_Q3LW25 Cluster: Ribosomal protein L34; n=1; Bigelowiella
natans|Rep: Ribosomal protein L34 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 90
Score = 33.5 bits (73), Expect = 2.0
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 45 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 146
R+T ++R +Y T SN+ I + GG+ V +Y+KK
Sbjct: 2 RITLKKRKTYKTNSNKFIIKKILGGKYVAKYIKK 35
Score = 31.9 bits (69), Expect = 6.2
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 238 RKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 345
+K + R+YG + HK VKQ+++ FL E K +++
Sbjct: 54 KKPRLSRIYGKEIHHKIVKQKLLIKFLKTENKSLRI 89
>UniRef50_Q74NH0 Cluster: NEQ297; n=1; Nanoarchaeum equitans|Rep:
NEQ297 - Nanoarchaeum equitans
Length = 83
Score = 33.1 bits (72), Expect = 2.7
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 106 GHRVAAWFISM*KSPRRSQGCGQCKSKLRGIQPARPAE--RSRLCYRKKTVKRVYGGVLC 279
G RV + SP + C C L+G+ PA +S RKK V R +GG LC
Sbjct: 12 GGRVTVLYKRRKPSPAK---CAICGRPLQGVV-REPAYWLKSEPKQRKK-VSRKFGGYLC 66
Query: 280 HKCVKQRIVR 309
H+C ++ I R
Sbjct: 67 HECARRVIAR 76
>UniRef50_Q975K6 Cluster: 50S ribosomal protein L34e; n=2;
Sulfolobus|Rep: 50S ribosomal protein L34e - Sulfolobus
tokodaii
Length = 87
Score = 33.1 bits (72), Expect = 2.7
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI 303
C CK L+G++ + S+ +K +R+YGG +C+KC++ I
Sbjct: 37 CAICKKPLQGVKTNLLYKYSKT---EKRPERMYGGYICYKCLENLI 79
>UniRef50_UPI0000E4799B Cluster: PREDICTED: similar to zinc
transporter ZnT-2; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to zinc transporter
ZnT-2 - Strongylocentrotus purpuratus
Length = 379
Score = 32.7 bits (71), Expect = 3.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 289 HIYGRGHHHKHVSLFSYGSKDGNV 218
H +G GH H H SLF GSKD +
Sbjct: 190 HSHGGGHGHSHGSLFGGGSKDDEI 213
>UniRef50_A1RXV1 Cluster: Ribosomal protein L34e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L34e - Thermofilum
pendens (strain Hrk 5)
Length = 91
Score = 32.7 bits (71), Expect = 3.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 63 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
R + ++S +R++VRTPGGRL + K P+
Sbjct: 3 RPALRSRSKKRKLVRTPGGRLALHVIDKKHDYPK 36
>UniRef50_Q9UZJ7 Cluster: 50S ribosomal protein L34e; n=8;
Archaea|Rep: 50S ribosomal protein L34e - Pyrococcus
abyssi
Length = 91
Score = 32.7 bits (71), Expect = 3.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 72 YNTKSNQRRIVRTPGGRLVYQYVKKPKKI 158
Y ++S +R+ VRTPGGR+V + ++ KI
Sbjct: 5 YRSRSWRRKYVRTPGGRVVIHFERRKPKI 33
>UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 1221
Score = 31.9 bits (69), Expect = 6.2
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 374 DLVLACCALRTFTIFCSSMRKALTMRCLTHLWQR 273
DL LA C T C+ AL CLT LW R
Sbjct: 421 DLTLAVCLSVFITFLCAFCLGALARPCLTRLWMR 454
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,059,803
Number of Sequences: 1657284
Number of extensions: 7117960
Number of successful extensions: 16110
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16102
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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