Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_G05
         (438 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0790 - 21214282-21214369,21214455-21214564,21215478-212155...    66   9e-12
08_01_0372 + 3286861-3286939,3287220-3287299,3289041-3289150,328...    66   9e-12
09_04_0106 - 14636773-14636863,14636948-14637057,14638107-146381...    66   1e-11
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421...    29   1.6  
02_01_0076 + 540182-540583,541266-541475,541557-542018,542112-54...    27   8.7  

>08_02_0790 -
           21214282-21214369,21214455-21214564,21215478-21215557,
           21215659-21215737
          Length = 118

 Score = 66.5 bits (155), Expect = 9e-12
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = +3

Query: 36  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
           MVQRLT+R+R SY TKSNQ R+V+TPGGRLVYQY KK    P+
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK 43



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
 Frame = +1

Query: 151 RRSQG--CGQCKSKLRGIQPARPAE--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFL 318
           +R+ G  C     K++GI   RPAE  RSRL   ++TV R YGGVL    V++RI+RAFL
Sbjct: 37  KRASGPKCPVTGKKIQGIPHLRPAEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFL 96

Query: 319 IEEQKIVK 342
           +EEQKIVK
Sbjct: 97  VEEQKIVK 104


>08_01_0372 +
           3286861-3286939,3287220-3287299,3289041-3289150,
           3289224-3289311
          Length = 118

 Score = 66.5 bits (155), Expect = 9e-12
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = +3

Query: 36  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
           MVQRLT+R+R SY TKSNQ R+V+TPGGRLVYQY KK    P+
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK 43



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
 Frame = +1

Query: 151 RRSQG--CGQCKSKLRGIQPARPAE--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFL 318
           +R+ G  C     K++GI   RPAE  RSRL   ++TV R YGGVL    V++RI+RAFL
Sbjct: 37  KRASGPKCPVTGKKIQGIPHLRPAEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFL 96

Query: 319 IEEQKIVK 342
           +EEQKIVK
Sbjct: 97  VEEQKIVK 104


>09_04_0106 -
           14636773-14636863,14636948-14637057,14638107-14638186,
           14638302-14638380
          Length = 119

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
 Frame = +1

Query: 151 RRSQG--CGQCKSKLRGIQPARPAE--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFL 318
           +R+ G  C     K++GI   RPAE  RSRL   ++TV R YGGVL    V++RI+RAFL
Sbjct: 37  KRASGPKCPVTGKKIQGIPHLRPAEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFL 96

Query: 319 IEEQKIVK 342
           +EEQKIVK
Sbjct: 97  VEEQKIVK 104



 Score = 65.3 bits (152), Expect = 2e-11
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = +3

Query: 36  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
           MVQRLT+R+R SY TKSNQ R+V+TPGG+LVYQY KK    P+
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK 43


>05_05_0034 - 21741148-21741275,21741890-21741928,21742007-21742121,
            21742227-21742292,21743213-21743371,21743573-21743609,
            21743757-21744194,21744735-21744817,21744920-21744956,
            21745146-21745214,21745316-21745407,21745481-21745565,
            21745903-21745982,21746327-21746724,21746813-21747717,
            21747825-21747915,21748617-21750680,21750681-21750749,
            21750850-21751273,21751644-21751763
          Length = 1832

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 148  PRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQR 300
            P   Q CG C  +L+  +     E  + C   +T   +    +CH CV +R
Sbjct: 1660 PLMQQSCGYCADELKDTR-----EAPKPCCNPQTEGGLCSNEMCHNCVSER 1705


>02_01_0076 +
           540182-540583,541266-541475,541557-542018,542112-542222,
           542309-542488,543083-543367,544581-544701,544802-544923
          Length = 630

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  SNQRRIVRTPGGRLVYQYVKKPKKIPRXWSVQ 179
           +N R  V +PG  +  Q + KP+K+P  +S++
Sbjct: 181 TNFRLEVFSPGSEIDLQDLSKPRKVPADFSIR 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,390,862
Number of Sequences: 37544
Number of extensions: 202201
Number of successful extensions: 476
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)