Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_G05
         (438 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457741-15|CAM36357.1|  110|Caenorhabditis elegans Hypothetical...    65   2e-11
U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U14635-13|AAC46654.2|  322|Caenorhabditis elegans Hypothetical p...    27   7.9  

>CU457741-15|CAM36357.1|  110|Caenorhabditis elegans Hypothetical
           protein C42C1.14 protein.
          Length = 110

 Score = 65.3 bits (152), Expect = 2e-11
 Identities = 28/43 (65%), Positives = 37/43 (86%)
 Frame = +3

Query: 36  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 164
           M  R+T+RRRLSYNT SN++R+V+TPGGRLV QY+KK  +IP+
Sbjct: 1   MSLRVTYRRRLSYNTTSNKKRLVKTPGGRLVVQYIKKRGQIPK 43



 Score = 60.5 bits (140), Expect = 5e-10
 Identities = 31/58 (53%), Positives = 35/58 (60%)
 Frame = +1

Query: 166 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIV 339
           C     KL GI PARP     L   ++TV R YGG L    VK+RI RAFL+EEQKIV
Sbjct: 44  CRDTGVKLHGITPARPIALRLLKRNERTVTRAYGGCLSPNAVKERITRAFLVEEQKIV 101


>U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical
           protein ZK1290.5 protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 120 RLVYQYVKKPKKIPRXWSVQEQTPWYPAS*TC 215
           ++  +Y K P +I   WS+Q+  P  P S  C
Sbjct: 207 KIASKYQKSPAQICLRWSIQQNVPTVPKSTDC 238


>U14635-13|AAC46654.2|  322|Caenorhabditis elegans Hypothetical
           protein C27H5.6 protein.
          Length = 322

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 258 TFHCFLTVAKTGTFSRSSW 202
           TFHC LTV +    +R SW
Sbjct: 109 TFHCLLTVERVLAVNRVSW 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,941,747
Number of Sequences: 27780
Number of extensions: 175503
Number of successful extensions: 431
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)