Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_F19
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.3  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   5.4  
AY752909-1|AAV30083.1|   92|Anopheles gambiae peroxidase 14 prot...    23   7.2  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 197 VRYAAPDPSGVLEGRRPRGFLLEMMRRLVMR 289
           +RYAAP   G L  R  R  L  + R+  +R
Sbjct: 802 MRYAAPVWHGALTNRECRSLLKRVQRKAAIR 832


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 197 VRYAAPDPSGVLEGRRPRGFLLEMMRRLVMR 289
           +RYAAP  S  L+ R P   L  + R++ +R
Sbjct: 787 MRYAAPVWSKELQKREPGRLLERVQRKMALR 817


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 9/44 (20%), Positives = 23/44 (52%)
 Frame = +1

Query: 175 FVLVQCLCSLRGARSVRRAGGTSPSRILTRDDAEIGDAIDGQVR 306
           F+ +  LC++   +++++  G +PSR  ++    +     GQ +
Sbjct: 136 FIFLYILCTMSIRQNIQKMLGFAPSRAASKQGRRLFGPTPGQFK 179


>AY752909-1|AAV30083.1|   92|Anopheles gambiae peroxidase 14
           protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 468 ARVPIRPNCVEVYKHSAHIAPPAQRIQ 388
           A +P+RP     + H+   APP  R Q
Sbjct: 34  AALPVRPLAHPEHVHAGGSAPPVHREQ 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,649
Number of Sequences: 2352
Number of extensions: 9555
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)