Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_F17
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128119-1|AAI28120.1|  330|Homo sapiens C6orf185 protein protein.     31   4.7  
BC128118-1|AAI28119.1|  379|Homo sapiens C6orf185 protein protein.     31   4.7  

>BC128119-1|AAI28120.1|  330|Homo sapiens C6orf185 protein protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +2

Query: 317 NESKAQVWAFLLWKCSSAREGSAVSTDNSWKL-YQQWCRMPEAQRNAWITAGQNVQSLSK 493
           N +K Q+WA     CS A     V +   W+L  QQ C   +  R    T  +++QS  +
Sbjct: 95  NPAKEQLWALEQDNCSLANLVCKVRSLGRWRLAVQQACFQAQLSR----TEKESIQSKKE 150

Query: 494 YAHAKVM 514
           Y   K+M
Sbjct: 151 YLRIKLM 157


>BC128118-1|AAI28119.1|  379|Homo sapiens C6orf185 protein protein.
          Length = 379

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +2

Query: 317 NESKAQVWAFLLWKCSSAREGSAVSTDNSWKL-YQQWCRMPEAQRNAWITAGQNVQSLSK 493
           N +K Q+WA     CS A     V +   W+L  QQ C   +  R    T  +++QS  +
Sbjct: 95  NPAKEQLWALEQDNCSLANLVCKVRSLGRWRLAVQQACFQAQLSR----TEKESIQSKKE 150

Query: 494 YAHAKVM 514
           Y   K+M
Sbjct: 151 YLRIKLM 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,561,485
Number of Sequences: 237096
Number of extensions: 2246380
Number of successful extensions: 4416
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4412
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)