Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_F16
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54785| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 8e-17
SB_11216| Best HMM Match : GILT (HMM E-Value=6.7e-10) 62 3e-10
SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32) 32 0.47
SB_57671| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.81
SB_53367| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.81
SB_18309| Best HMM Match : Exo_endo_phos (HMM E-Value=2.3e-09) 31 0.81
SB_52564| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-09) 31 0.81
SB_11838| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.81
SB_40519| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_58034| Best HMM Match : VWA (HMM E-Value=0) 29 3.3
SB_30338| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_4041| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.072) 28 5.7
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.6
SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_54785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 84.2 bits (199), Expect = 8e-17
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Frame = +1
Query: 169 VQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSINNGGDG-FECQHGP 345
V +S++YES C + I +QL+PT K+ +D+ L+P+G A G F CQHG
Sbjct: 27 VAISLYYESMCGGCRDMIRDQLYPTFQKVGSIMDITLVPYGNAQEYRYGNKWVFNCQHGQ 86
Query: 346 PECFGNLIQDCTLNEMKSYSD----VHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVR 513
EC GN+I+ C +N +K+ S +H E ++ + C + + + P+
Sbjct: 87 GECEGNIIEVCAINVLKNISAYFPFIHCFEQFISSYNPSSTAQ---YCAKQLGIDYAPIE 143
Query: 514 ECVYLGPGTLLQLDSERLTKLVNPK--FIPTIVLDGVFDQATQNKA-FN 651
+C G L+ + T + P+ ++P + L+G + QN+A FN
Sbjct: 144 KCASGLQGNELEHEMGVETDALVPRHNYVPWVTLNGEHTEEIQNQATFN 192
>SB_11216| Best HMM Match : GILT (HMM E-Value=6.7e-10)
Length = 311
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 166 KVQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSIN-NGGDGFECQHG 342
KV+L+V+Y S + + F++ QL+PT +K+ + +D+ ++PFG I G + C +G
Sbjct: 27 KVKLAVYYNSKNPEFRRFMVAQLYPTSNKIPNILDISMVPFGDGKEIKAKSGFQYYCTNG 86
Query: 343 PPECFGNLIQDCTL 384
EC NLIQ C +
Sbjct: 87 AEECLENLIQACAV 100
>SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32)
Length = 823
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 403 SDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVRECVYLGPGTLLQLDSERLTKLVN 582
+D K E L + +++ + ++ PH +++ + G +QLD+ R+ K
Sbjct: 46 NDTCKAEALRAQYDSVFTQEDNLNVPTLGASPHQDIKDISFSVNGVRVQLDNIRVDKACG 105
Query: 583 PKFIPTIVL 609
P +P VL
Sbjct: 106 PDAVPARVL 114
>SB_57671| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 533
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 403 SDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVRECVYLGPGTLLQLDSERLTKLVN 582
+D K E L + +++ + ++ PH +++ + G +QLD+ R+ K
Sbjct: 45 NDKCKAEALRAQYDSVFTQEDNLNVPTLGASPHQDIKDISFSVNGVRVQLDNIRVDKACG 104
Query: 583 PKFIPTIVL 609
P +P VL
Sbjct: 105 PDAVPARVL 113
>SB_53367| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1025
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 403 SDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVRECVYLGPGTLLQLDSERLTKLVN 582
+D K E L + +++ + ++ PH +++ + G +QLD+ R+ K
Sbjct: 557 NDKCKAEALRAQYDSVFTQEDNLNVPTLGASPHQDIKDISFSVNGVRVQLDNIRVDKACG 616
Query: 583 PKFIPTIVL 609
P +P VL
Sbjct: 617 PDAVPARVL 625
>SB_18309| Best HMM Match : Exo_endo_phos (HMM E-Value=2.3e-09)
Length = 895
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 403 SDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVRECVYLGPGTLLQLDSERLTKLVN 582
+D K E L + +++ + ++ PH +++ + G +QLD+ R+ K
Sbjct: 606 NDKCKAEALRAQYDSVFTQEDNLNVPTLGASPHQDIKDISFSVNGVRVQLDNIRVDKACG 665
Query: 583 PKFIPTIVL 609
P +P VL
Sbjct: 666 PDAVPARVL 674
>SB_52564| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-09)
Length = 748
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 403 SDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVRECVYLGPGTLLQLDSERLTKLVN 582
+D K E L + +++ + ++ PH +++ + G +QLD+ R+ K
Sbjct: 519 NDKCKAEALRAQYDSVFTQEDNLNVPTLGASPHQDIKDISFSVNGVRVQLDNIRVDKACG 578
Query: 583 PKFIPTIVL 609
P +P VL
Sbjct: 579 PDAVPARVL 587
>SB_11838| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1009
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 403 SDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVRECVYLGPGTLLQLDSERLTKLVN 582
+D K E L + +++ + ++ PH +++ + G +QLD+ R+ K
Sbjct: 489 NDKCKAEALRAQYDSVFTQEDNLNVPTLGASPHQDIKDISFSVNGVRVQLDNIRVDKACG 548
Query: 583 PKFIPTIVL 609
P +P VL
Sbjct: 549 PDAVPARVL 557
>SB_40519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 460 RGDIQCIVKSNVPHDPVRECVYLGP 534
RG ++C+VK++ H+P+R V + P
Sbjct: 362 RGRLECVVKTSHHHEPIRHIVVVRP 386
>SB_58034| Best HMM Match : VWA (HMM E-Value=0)
Length = 1203
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 205 QSKRFHKKPKVGPFFSSQLLYR--KRPKSRKYLQKT 104
+++RF K+PK+ P FS L R K + ++YL +T
Sbjct: 1009 RTRRFFKRPKLRPLFSKTQLSRLEKEFEEKRYLTET 1044
>SB_30338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 142 CIGVDLKRKVQLSVFYESACSDS-KHFILEQLHPTIHKLEDYIDLQLIPFGKASSINNGG 318
C+ D+ K + +FY SACS + +I+ + LE D+ + F + + NG
Sbjct: 146 CLPRDVTVKFPIKLFYRSACSQALLDYIIVHIGRGQTFLELTEDISSMNFRSYTQLKNGA 205
Query: 319 DG 324
+G
Sbjct: 206 NG 207
>SB_4041| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.072)
Length = 250
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 267 RLAAHTFWEGIEYKQWWGRIRMST 338
RLA HTF I+Y Q W +R+ T
Sbjct: 11 RLALHTFENVIKYLQCWTNLRIQT 34
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 265 IDLQLIPFGKASSINNGGDGFECQHGPPECFGNLIQ 372
+D Q IPF + + +NG G + G P +G IQ
Sbjct: 3481 VDDQGIPFKSSDTSSNGNGGVQISQGNPMTYGAGIQ 3516
>SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 199 KRFHKKPKVGPFFSSQLLYR--KRPKSRKYLQKT 104
KRF +KPK P FS + R K K KYL ++
Sbjct: 196 KRFMRKPKQRPLFSHNQIQRLEKEFKEEKYLTES 229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,956,849
Number of Sequences: 59808
Number of extensions: 481701
Number of successful extensions: 1239
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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