Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_F14
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 38 0.009
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 38 0.009
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 38 0.009
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 38 0.009
AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical ... 37 0.011
AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical ... 34 0.11
Z68748-2|CAA92955.3| 374|Caenorhabditis elegans Hypothetical pr... 33 0.14
U23484-4|AAC46768.2| 260|Caenorhabditis elegans Nudix family pr... 33 0.14
AF305937-1|AAG37064.1| 348|Caenorhabditis elegans NADH pyrophos... 33 0.14
AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family ... 32 0.32
U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family pr... 32 0.43
Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical pr... 30 1.3
AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein. 30 1.3
AY204188-1|AAO39192.1| 364|Caenorhabditis elegans nuclear recep... 29 3.0
AF100669-6|AAM97937.1| 242|Caenorhabditis elegans Nuclear hormo... 29 3.0
AF100669-5|AAU05545.1| 364|Caenorhabditis elegans Nuclear hormo... 29 3.0
AF100669-4|AAM97936.1| 395|Caenorhabditis elegans Nuclear hormo... 29 3.0
AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical ... 29 3.0
Z80223-2|CAB02320.1| 344|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z82288-4|CAB05321.1| 295|Caenorhabditis elegans Hypothetical pr... 28 6.9
U41022-2|AAA82339.2| 373|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 416 WKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLR 532
W +P G VE GE I++AV+REV EETG +++L+
Sbjct: 104 WYMPAGRVEAGETIEEAVVREVKEETGYSCDVVELLSLQ 142
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 413 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 592
+W P G + + E +DA IRE EETG + I + + F N + + ++K
Sbjct: 267 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 323
Query: 593 ISDTIN---KSEIEIAACQWMDVDE 658
+ N ++ EI +W +D+
Sbjct: 324 VPKDFNFQPQTRKEIRKIEWFKIDD 348
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 413 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 592
+W P G + + E +DA IRE EETG + I + + F N + + ++K
Sbjct: 290 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 346
Query: 593 ISDTIN---KSEIEIAACQWMDVDE 658
+ N ++ EI +W +D+
Sbjct: 347 VPKDFNFQPQTRKEIRKIEWFKIDD 371
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 413 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 592
+W P G + + E +DA IRE EETG + I + + F N + + ++K
Sbjct: 251 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 307
Query: 593 ISDTIN---KSEIEIAACQWMDVDE 658
+ N ++ EI +W +D+
Sbjct: 308 VPKDFNFQPQTRKEIRKIEWFKIDD 332
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 413 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 592
+W P G + + E +DA IRE EETG + I + + F N + + ++K
Sbjct: 267 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 323
Query: 593 ISDTIN---KSEIEIAACQWMDVDE 658
+ N ++ EI +W +D+
Sbjct: 324 VPKDFNFQPQTRKEIRKIEWFKIDD 348
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 413 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 592
+W P G + + E +DA IRE EETG + I + + F N + + ++K
Sbjct: 290 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 346
Query: 593 ISDTIN---KSEIEIAACQWMDVDE 658
+ N ++ EI +W +D+
Sbjct: 347 VPKDFNFQPQTRKEIRKIEWFKIDD 371
>AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical
protein Y92H12BL.5 protein.
Length = 150
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 377 ILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEAS 508
++++V D W +PGG +E+ E ++A RE+MEE G+ A+
Sbjct: 40 LVLLVSGGKDGGKWVVPGGGIEKDECAEEAAHRELMEEAGVRAT 83
>AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical
protein Y37H9A.6 protein.
Length = 138
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 413 HWKLPGGYVERGEDIKDAVIREVMEETGI 499
HW P G+V+ GED A IRE EE I
Sbjct: 31 HWTPPKGHVDPGEDEWQAAIRETKEEANI 59
>Z68748-2|CAA92955.3| 374|Caenorhabditis elegans Hypothetical
protein F13H10.2 protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 431 GYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIV-VMLKAISDTI 607
G+ GE + + RE+ EE GIE DSI +L S +S + I V + I I
Sbjct: 244 GFAHSGESMAECARREIAEEVGIEV--DSIRSLDMSQPWPMPDSSLMIAHVAVAKIDQKI 301
Query: 608 NKSEIEIAACQW 643
+ E+ QW
Sbjct: 302 SVCPDELETAQW 313
>U23484-4|AAC46768.2| 260|Caenorhabditis elegans Nudix family
protein 6 protein.
Length = 260
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 362 NSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEE 490
N + V Q D W +PGG V+ GE + + RE EE
Sbjct: 125 NDNGDLEFVAVQRHDNGEWAIPGGMVDAGEHVSQTLRREFAEE 167
>AF305937-1|AAG37064.1| 348|Caenorhabditis elegans NADH
pyrophosphatase protein.
Length = 348
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 431 GYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIV-VMLKAISDTI 607
G+ GE + + RE+ EE GIE DSI +L S +S + I V + I I
Sbjct: 218 GFAHSGESMAECARREIAEEVGIEV--DSIRSLDMSQPWPMPDSSLMIAHVAVAKIDQKI 275
Query: 608 NKSEIEIAACQW 643
+ E+ QW
Sbjct: 276 SVCPDELETAQW 287
>AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family
protein 2 protein.
Length = 223
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 419 KLPGGYVERGEDIKDAVIREVMEETG 496
+LP G ++ GE + A IRE+ EETG
Sbjct: 107 ELPAGLIDAGETAQQAAIRELKEETG 132
>U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family
protein 3 protein.
Length = 188
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 425 PGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISD 601
PGG ++ GE + +RE EE G+ A +S+ H + + +D + ++ ISD
Sbjct: 35 PGGRMDPGETTTETALRETFEEIGVNA--ESVEIWGHLKSVIRRQADFNVTPIVGYISD 91
>Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical
protein F09B12.6 protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 VFNSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVM-EETGIEASFDSIVTLR 532
V N N+I+ + + D + Y+ RG +KD +++E + E+T I+ +++ L
Sbjct: 101 VTNDNNRIVNFLGIYADSNQMYIMSEYLPRGS-VKDLLVKETLGEDTAIKYLMETVEALD 159
Query: 533 HSHN 544
+ HN
Sbjct: 160 YLHN 163
>AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 356 VFNSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVM-EETGIEASFDSIVTLR 532
V N N+I+ + + D + Y+ RG +KD +++E + E+T I+ +++ L
Sbjct: 101 VTNDNNRIVNFLGIYADSNQMYIMSEYLPRGS-VKDLLVKETLGEDTAIKYLMETVEALD 159
Query: 533 HSHN 544
+ HN
Sbjct: 160 YLHN 163
>AY204188-1|AAO39192.1| 364|Caenorhabditis elegans nuclear receptor
NHR-104 protein.
Length = 364
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 152 FKELFKILRKSFSVYSIWESTVIPLYLSPAPLKISSVILRCFF 24
+KE +++L + F + S W S PL+ P ++LR F+
Sbjct: 147 YKETYRLLLREFYLVSDWVSNCFPLF-KELPNSQKDILLRNFY 188
>AF100669-6|AAM97937.1| 242|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 104, isoform b protein.
Length = 242
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 152 FKELFKILRKSFSVYSIWESTVIPLYLSPAPLKISSVILRCFF 24
+KE +++L + F + S W S PL+ P ++LR F+
Sbjct: 147 YKETYRLLLREFYLVSDWVSNCFPLF-KELPNSQKDILLRNFY 188
>AF100669-5|AAU05545.1| 364|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 104, isoform c protein.
Length = 364
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 152 FKELFKILRKSFSVYSIWESTVIPLYLSPAPLKISSVILRCFF 24
+KE +++L + F + S W S PL+ P ++LR F+
Sbjct: 147 YKETYRLLLREFYLVSDWVSNCFPLF-KELPNSQKDILLRNFY 188
>AF100669-4|AAM97936.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 104, isoform a protein.
Length = 395
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 152 FKELFKILRKSFSVYSIWESTVIPLYLSPAPLKISSVILRCFF 24
+KE +++L + F + S W S PL+ P ++LR F+
Sbjct: 147 YKETYRLLLREFYLVSDWVSNCFPLF-KELPNSQKDILLRNFY 188
>AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical
protein T07D3.6 protein.
Length = 308
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 121 DFLSILNNSLKKWSEQNKRCIWFKVNIKHADWVPILAKAGFDFHHS 258
DFL +L+N++ KWS ++R I VN+ H+ + +K F+ +
Sbjct: 108 DFLKMLDNNVCKWS--SERVIKVAVNLNHSPITYLNSKLDIIFYEN 151
>Z80223-2|CAB02320.1| 344|Caenorhabditis elegans Hypothetical
protein F26D10.8 protein.
Length = 344
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -1
Query: 230 ASMGTQSACFIFTLNHMQRLFCSDHFFKELFKILRKSFSVYSIWESTVIPLYLSP 66
ASM ++ FI+ + R F S + F +L VYS+W +TV+ ++ P
Sbjct: 97 ASMALFASHFIYRFGSLDRSFGSRYTSGWKFGVLFFIPLVYSVWWATVVRVWFWP 151
>Z82288-4|CAB05321.1| 295|Caenorhabditis elegans Hypothetical
protein ZK896.6 protein.
Length = 295
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 223 ILAKAGFDFHHSRXQFCYDVQMVAYKQQSQFATSMPYKSWCRRY 354
+ A AG +FH + F +Q+V + + + A++ YK+W Y
Sbjct: 71 LAAIAGTEFHATYGNFWIGLQLVDGQWEWEDASTSTYKNWAPGY 114
>U41022-2|AAA82339.2| 373|Caenorhabditis elegans Hypothetical
protein K08B5.1 protein.
Length = 373
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 135 NTKKIVLSIFYLGINCNSIVSISCALKDFFSH 40
NTK I+L + I CN+ +++ C K F S+
Sbjct: 60 NTKVILLVLCISAIICNTGITVDCLYKFFISN 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,157,455
Number of Sequences: 27780
Number of extensions: 325349
Number of successful extensions: 941
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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