Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_F13
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 25 0.60
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 4.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.8
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 25.0 bits (52), Expect = 0.60
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 498 DRLHKDIYQEIRHAAEAHRQTRKHIRN 578
+R H+DI+ AE H ++R+ RN
Sbjct: 1111 NRYHEDIFGITLRTAEVHNRSRETARN 1137
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/26 (26%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 510 KDIYQEIRHAAEAH-RQTRKHIRNWI 584
+D+YQ ++H + H T K + ++
Sbjct: 1079 EDVYQTLKHIIQTHGEMTDKQVEAYM 1104
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 IDERTAKNRFT-SXEKRALDRLHKDIYQEIRHAAEAHRQTR 563
++ERT++NR++ S E+ ++ YQ+ R ++ + R
Sbjct: 30 LEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDR 70
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 IDERTAKNRFT-SXEKRALDRLHKDIYQEIRHAAEAHRQTR 563
++ERT++NR++ S E+ ++ YQ+ R ++ + R
Sbjct: 30 LEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDR 70
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 IDERTAKNRFT-SXEKRALDRLHKDIYQEIRHAAEAHRQTR 563
++ERT++NR++ S E+ ++ YQ+ R ++ + R
Sbjct: 30 LEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDR 70
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 IDERTAKNRFT-SXEKRALDRLHKDIYQEIRHAAEAHRQTR 563
++ERT++NR++ S E+ ++ YQ+ R ++ + R
Sbjct: 30 LEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDR 70
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 IDERTAKNRFT-SXEKRALDRLHKDIYQEIRHAAEAHRQTR 563
++ERT++NR++ S E+ ++ YQ+ R ++ + R
Sbjct: 30 LEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDR 70
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 IDERTAKNRFT-SXEKRALDRLHKDIYQEIRHAAEAHRQTR 563
++ERT++NR++ S E+ ++ YQ+ R ++ + R
Sbjct: 30 LEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDR 70
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 IDERTAKNRFT-SXEKRALDRLHKDIYQEIRHAAEAHRQTR 563
++ERT++NR++ S E+ ++ YQ+ R ++ + R
Sbjct: 30 LEERTSRNRYSRSREREQNSYKNEREYQKYRETSKERSRDR 70
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 152 FCVTFIDNLYIVIFSIFHYIFGNIIFC 72
F +D L +++F++F + +I C
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILC 453
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 152 FCVTFIDNLYIVIFSIFHYIFGNIIFC 72
F +D L +++F++F + +I C
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILC 453
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 152 FCVTFIDNLYIVIFSIFHYIFGNIIFC 72
F +D L +++F++F + +I C
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILC 453
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 152 FCVTFIDNLYIVIFSIFHYIFGNIIFC 72
F +D L +++F++F + +I C
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILC 453
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 152 FCVTFIDNLYIVIFSIFHYIFGNIIFC 72
F +D L +++F++F + +I C
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILC 453
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 152 FCVTFIDNLYIVIFSIFHYIFGNIIFC 72
F +D L +++F++F + +I C
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILC 453
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 152 FCVTFIDNLYIVIFSIFHYIFGNIIFC 72
F +D L +++F++F + +I C
Sbjct: 495 FAAMVVDRLCLIVFTLFTVLATIVILC 521
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 152 FCVTFIDNLYIVIFSIFHYIFGNIIFC 72
F +D L +++F++F + +I C
Sbjct: 495 FAAMVVDRLCLIVFTLFTVLATIVILC 521
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 391 GNSSATGIVGGTV 353
G+S+ G+VGGT+
Sbjct: 8 GSSAGVGVVGGTI 20
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 474 TSXEKRALDRLHKDIYQE 527
T+ E RA D H D Y+E
Sbjct: 164 TTFEPRATDSRHYDRYKE 181
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,633
Number of Sequences: 438
Number of extensions: 1968
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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