Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_E12
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39748 Cluster: Flap endonuclease 1; n=22; Eumetazoa|Re... 199 5e-50
UniRef50_Q9SXQ6 Cluster: Flap endonuclease 1a; n=14; Eukaryota|R... 178 8e-44
UniRef50_Q76F73 Cluster: Flap endonuclease-1; n=2; Agaricomycoti... 177 2e-43
UniRef50_P26793 Cluster: Structure-specific endonuclease RAD27; ... 173 2e-42
UniRef50_Q4FYU7 Cluster: Flap endonuclease-1 (FEN-1), putative; ... 168 1e-40
UniRef50_UPI000049A186 Cluster: FEN-1 nuclease; n=1; Entamoeba h... 161 1e-38
UniRef50_A7F0Q6 Cluster: Putative uncharacterized protein; n=1; ... 159 7e-38
UniRef50_Q9U0K1 Cluster: Flap endonuclease 1; n=10; Eukaryota|Re... 158 9e-38
UniRef50_Q75LI2 Cluster: Flap endonuclease 1b; n=8; Magnoliophyt... 156 5e-37
UniRef50_Q4TAK8 Cluster: Chromosome undetermined SCAF7301, whole... 151 2e-35
UniRef50_Q54NU0 Cluster: XPG; n=1; Dictyostelium discoideum AX4|... 147 2e-34
UniRef50_Q8SS91 Cluster: STRUCTURE-SPECIFIC ENDONUCLEASE OF THE ... 140 3e-32
UniRef50_Q013G9 Cluster: FEN-1; n=1; Ostreococcus tauri|Rep: FEN... 139 5e-32
UniRef50_A2GNP0 Cluster: XPG I-region family protein; n=1; Trich... 136 3e-31
UniRef50_Q4A3A7 Cluster: Putative endonuclease; n=1; Emiliania h... 135 8e-31
UniRef50_Q7R289 Cluster: GLP_422_59630_60715; n=1; Giardia lambl... 135 8e-31
UniRef50_A3FPN7 Cluster: Flap endonuclease 1; n=2; Cryptosporidi... 133 4e-30
UniRef50_A7AX58 Cluster: XPG N-terminal domain and XPG I-region ... 124 2e-27
UniRef50_Q4UFP0 Cluster: 5'-3' exonuclease, putative; n=2; Theil... 123 3e-27
UniRef50_Q75DS8 Cluster: ABL052Cp; n=1; Eremothecium gossypii|Re... 123 4e-27
UniRef50_Q976H6 Cluster: Flap structure-specific endonuclease; n... 118 9e-26
UniRef50_P61942 Cluster: Flap structure-specific endonuclease; n... 112 8e-24
UniRef50_A0CXT3 Cluster: Chromosome undetermined scaffold_30, wh... 109 6e-23
UniRef50_Q8PYF6 Cluster: Flap structure-specific endonuclease; n... 102 9e-21
UniRef50_Q6L2I9 Cluster: Flap structure-specific endonuclease; n... 97 2e-19
UniRef50_UPI0000E488A6 Cluster: PREDICTED: hypothetical protein;... 93 4e-18
UniRef50_Q2NFD4 Cluster: Flap structure-specific endonuclease; n... 92 1e-17
UniRef50_A0RU95 Cluster: 5'-3' exonuclease; n=2; Thermoprotei|Re... 90 4e-17
UniRef50_Q58839 Cluster: Flap structure-specific endonuclease; n... 89 9e-17
UniRef50_A2SQC6 Cluster: XPG I; n=5; Archaea|Rep: XPG I - Methan... 88 1e-16
UniRef50_Q5UQW7 Cluster: Putative endonuclease L386; n=1; Acanth... 71 2e-11
UniRef50_Q4P7L5 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_A1RXA5 Cluster: XPG I; n=1; Thermofilum pendens Hrk 5|R... 65 2e-09
UniRef50_P28706 Cluster: DNA-repair protein rad13; n=1; Schizosa... 63 6e-09
UniRef50_Q6C8E7 Cluster: Similar to sp|P28706 Schizosaccharomyce... 62 1e-08
UniRef50_Q5KPE3 Cluster: Single-stranded DNA specific endodeoxyr... 60 3e-08
UniRef50_A0E7S1 Cluster: Chromosome undetermined scaffold_81, wh... 60 5e-08
UniRef50_Q6FTW3 Cluster: Candida glabrata strain CBS138 chromoso... 60 6e-08
UniRef50_Q9HQ27 Cluster: Flap structure-specific endonuclease; n... 59 8e-08
UniRef50_Q6CXC7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 59 1e-07
UniRef50_A7PMD6 Cluster: Chromosome chr14 scaffold_21, whole gen... 58 1e-07
UniRef50_A3LTL9 Cluster: Predicted protein; n=2; Saccharomycetal... 58 1e-07
UniRef50_A6R130 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_P07276 Cluster: DNA-repair protein RAD2; n=3; Saccharom... 58 2e-07
UniRef50_A7TT55 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_UPI00006CAA8D Cluster: XPG N-terminal domain containing... 57 3e-07
UniRef50_A5DGX2 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_A1CT40 Cluster: DNA excision repair protein Rad2; n=8; ... 57 4e-07
UniRef50_A5E4G0 Cluster: Putative uncharacterized protein; n=1; ... 56 6e-07
UniRef50_Q5CF23 Cluster: RAD2; n=3; Cryptosporidium|Rep: RAD2 - ... 56 7e-07
UniRef50_Q9ATY5 Cluster: DNA-repair protein UVH3; n=1; Arabidops... 56 7e-07
UniRef50_Q6BH44 Cluster: Similar to CA2827|CaRAD2 Candida albica... 56 1e-06
UniRef50_A7EV70 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A6RKP9 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A3B6B8 Cluster: Putative uncharacterized protein; n=4; ... 55 1e-06
UniRef50_A4RG52 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q7SG44 Cluster: Putative uncharacterized protein NCU074... 55 2e-06
UniRef50_A2QGE7 Cluster: Remark: ORF 3'truncated due to end of c... 55 2e-06
UniRef50_A7RTI4 Cluster: Predicted protein; n=1; Nematostella ve... 54 2e-06
UniRef50_Q754D7 Cluster: AFR133Cp; n=1; Eremothecium gossypii|Re... 54 2e-06
UniRef50_Q10Q89 Cluster: XPG I-region family protein, expressed;... 54 3e-06
UniRef50_UPI00006D0076 Cluster: XPG I-region family protein; n=1... 53 5e-06
UniRef50_Q568J1 Cluster: Zgc:110269; n=4; Danio rerio|Rep: Zgc:1... 52 9e-06
UniRef50_UPI000058838C Cluster: PREDICTED: similar to XPGC prote... 48 2e-04
UniRef50_Q0V4Z7 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_UPI0000DB70EE Cluster: PREDICTED: similar to CG10890-PC... 48 3e-04
UniRef50_UPI0000E4749C Cluster: PREDICTED: hypothetical protein;... 45 0.001
UniRef50_Q0UPI5 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q54AQ1 Cluster: Xeroderma pigmentosum group G (XPG) fam... 45 0.002
UniRef50_UPI0000DA3193 Cluster: PREDICTED: similar to excision r... 44 0.002
UniRef50_Q8L6Z7 Cluster: Exonuclease, putative; n=5; core eudico... 44 0.003
UniRef50_Q4SHZ0 Cluster: Chromosome 5 SCAF14581, whole genome sh... 43 0.007
UniRef50_P28715 Cluster: DNA-repair protein complementing XP-G c... 42 0.010
UniRef50_Q4DC01 Cluster: DNA repair protein RAD2, putative; n=2;... 42 0.017
UniRef50_Q4AEJ2 Cluster: XPG; n=2; Gallus gallus|Rep: XPG - Gall... 41 0.030
UniRef50_Q60GC1 Cluster: Exonuclease-1; n=7; Magnoliophyta|Rep: ... 41 0.030
UniRef50_A2DAM0 Cluster: XPG N-terminal domain containing protei... 40 0.039
UniRef50_Q9UQ84 Cluster: Exonuclease 1; n=22; Mammalia|Rep: Exon... 40 0.052
UniRef50_P14629 Cluster: DNA-repair protein complementing XP-G c... 40 0.052
UniRef50_O44737 Cluster: Putative uncharacterized protein; n=2; ... 40 0.068
UniRef50_O96154 Cluster: DNA repair endonuclease, putative; n=1;... 39 0.090
UniRef50_UPI0000ECC8A8 Cluster: Exonuclease 1 (EC 3.1.-.-) (hExo... 39 0.12
UniRef50_Q2VQ32 Cluster: Single strand DNA repair-like protein; ... 39 0.12
UniRef50_Q4U9E4 Cluster: Endonuclease (Xp-g/RAD2 homologue), put... 39 0.12
UniRef50_Q38DL8 Cluster: DNA repair protein RAD2, putative; n=1;... 39 0.12
UniRef50_A5KBK9 Cluster: DNA repair endonuclease, putative; n=1;... 39 0.12
UniRef50_Q4Y208 Cluster: DNA repair endonuclease, putative; n=3;... 38 0.16
UniRef50_P53695 Cluster: Exodeoxyribonuclease 1; n=1; Schizosacc... 38 0.16
UniRef50_Q803U7 Cluster: Exonuclease 1; n=4; Danio rerio|Rep: Ex... 38 0.16
UniRef50_Q6ZN37 Cluster: CDNA FLJ16464 fis, clone BRHIP2012360; ... 38 0.21
UniRef50_A4HN29 Cluster: DNA repair protein RAD2, putative; n=3;... 38 0.28
UniRef50_Q4U2Q2 Cluster: XPG variant; n=7; Drosophila melanogast... 37 0.36
UniRef50_Q4JR61 Cluster: Putative uncharacterized protein; n=1; ... 37 0.36
UniRef50_A2E2N7 Cluster: XPG N-terminal domain containing protei... 37 0.36
UniRef50_A4RDX6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.36
UniRef50_Q9U9Q6 Cluster: GM10765p; n=3; Sophophora|Rep: GM10765p... 37 0.48
UniRef50_Q7PWJ6 Cluster: ENSANGP00000021368; n=1; Anopheles gamb... 36 0.64
UniRef50_Q8STM5 Cluster: Similarity to DNA repair protein RAD2; ... 36 0.64
UniRef50_Q9UTN2 Cluster: Uncharacterized protein C139.01c; n=1; ... 36 0.64
UniRef50_Q00XT2 Cluster: 5'-3' exonuclease; n=2; Ostreococcus|Re... 36 0.84
UniRef50_A7RUB0 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.84
UniRef50_Q9W6K2 Cluster: Exonuclease 1; n=4; Xenopus|Rep: Exonuc... 36 0.84
UniRef50_Q01FW1 Cluster: Exonuclease, putative; 92014-93872; n=2... 36 1.1
UniRef50_Q8WZX1 Cluster: Related to DNA repair endonuclease rad2... 36 1.1
UniRef50_Q4WXC8 Cluster: Exonuclease, putative; n=3; Eurotiomyce... 36 1.1
UniRef50_Q4P9S2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q91FF5 Cluster: 369L; n=1; Invertebrate iridescent viru... 35 1.5
UniRef50_A7ASU9 Cluster: Rad2 endonuclease, putative; n=1; Babes... 35 1.5
UniRef50_O58354 Cluster: Putative uncharacterized protein PH0620... 35 1.5
UniRef50_Q54ED2 Cluster: 5'3'-exonuclease N-and I-domain-contain... 35 1.9
UniRef50_UPI000023CEE4 Cluster: hypothetical protein FG04386.1; ... 34 2.6
UniRef50_Q7R2G0 Cluster: GLP_623_40575_38077; n=1; Giardia lambl... 34 2.6
UniRef50_A7EKN6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_UPI0000DB6CF0 Cluster: PREDICTED: similar to XPG-like e... 34 3.4
UniRef50_Q7QCK4 Cluster: ENSANGP00000021102; n=2; Culicidae|Rep:... 33 4.5
UniRef50_UPI0000D57844 Cluster: PREDICTED: similar to CG10387-PA... 33 5.9
UniRef50_Q4PAK0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q2GQN1 Cluster: Putative uncharacterized protein; n=6; ... 33 5.9
UniRef50_Q1E1S0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_UPI000049908F Cluster: exonuclease I; n=1; Entamoeba hi... 33 7.8
UniRef50_UPI0000162BF3 Cluster: DNA repair protein, putative; n=... 33 7.8
UniRef50_A0NI45 Cluster: Alpha-glucosidase; n=2; Firmicutes|Rep:... 33 7.8
UniRef50_Q9LPD2 Cluster: F22M8.2 protein; n=4; core eudicotyledo... 33 7.8
>UniRef50_P39748 Cluster: Flap endonuclease 1; n=22; Eumetazoa|Rep:
Flap endonuclease 1 - Homo sapiens (Human)
Length = 380
Score = 199 bits (485), Expect = 5e-50
Identities = 98/166 (59%), Positives = 120/166 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD+AP A++E +IK+YFGRK+AIDASMS+YQFLIAVR G L + +GET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG FYRTIR++ENGIKPVYVFDGKPP +K+ +L LQ+A AG
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
V+KF +RLVKVTKQH++E K LL LMG+ L P + S L
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAAL 166
>UniRef50_Q9SXQ6 Cluster: Flap endonuclease 1a; n=14; Eukaryota|Rep:
Flap endonuclease 1a - Oryza sativa subsp. japonica
(Rice)
Length = 380
Score = 178 bits (434), Expect = 8e-44
Identities = 88/157 (56%), Positives = 113/157 (71%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQ-LVSVDGE 330
MGI GL+KL+AD AP A+KE + ++YFGR+IA+DASMS+YQFLI V G + L + GE
Sbjct: 1 MGIKGLTKLLADNAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TSHL G F RTIRL+E GIKPVYVFDGKPPD+K +L L +A E GD
Sbjct: 61 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGD 120
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
+++KF++R VKVTKQH+EE K+LL+LMGV ++ P
Sbjct: 121 KDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAP 157
Score = 37.5 bits (83), Expect = 0.28
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
G PVV+APCEAEA+CAAL
Sbjct: 150 GVPVVEAPCEAEAECAAL 167
>UniRef50_Q76F73 Cluster: Flap endonuclease-1; n=2;
Agaricomycotina|Rep: Flap endonuclease-1 - Coprinus
cinereus (Inky cap fungus) (Hormographiella
aspergillata)
Length = 458
Score = 177 bits (430), Expect = 2e-43
Identities = 87/157 (55%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVD-GE 330
MGI GL+ L+ + AP+++KE +IK FGRK+AIDASMS+YQFLIAVR ++++ D GE
Sbjct: 1 MGIKGLTGLLNEHAPNSIKEHDIKTLFGRKVAIDASMSIYQFLIAVRQRDGEMLTNDAGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TTSHLMG FYRTIR+VENGIKP YVFDGKPP++K L+ ++A E G
Sbjct: 61 TTSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIGT 120
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
VD+F+RR VKVTKQH+EE ++LL+LM V ++ P
Sbjct: 121 AEDVDRFSRRTVKVTKQHNEECQKLLRLMSVPCVIAP 157
>UniRef50_P26793 Cluster: Structure-specific endonuclease RAD27;
n=55; Fungi/Metazoa group|Rep: Structure-specific
endonuclease RAD27 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 382
Score = 173 bits (422), Expect = 2e-42
Identities = 85/157 (54%), Positives = 115/157 (73%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSE-GAQLVSVDGE 330
MGI GL+ +I++ P A+++ +IK++FGRK+AIDASMSLYQFLIAVR + G QL + GE
Sbjct: 1 MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLTNEAGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TTSHLMG FYRT+R+++NGIKP YVFDGKPPD+K+H+L L +AT +
Sbjct: 61 TTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDLKSHELTKRSSRRVETEKKLAEATTELE 120
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
K RRLVKV+K+H+EEA++LL LMG+ ++ P
Sbjct: 121 KM---KQERRLVKVSKEHNEEAQKLLGLMGIPYIIAP 154
>UniRef50_Q4FYU7 Cluster: Flap endonuclease-1 (FEN-1), putative;
n=5; Trypanosomatidae|Rep: Flap endonuclease-1 (FEN-1),
putative - Leishmania major strain Friedlin
Length = 395
Score = 168 bits (408), Expect = 1e-40
Identities = 75/160 (46%), Positives = 115/160 (71%), Gaps = 4/160 (2%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS----EGAQLVSV 321
MGILGLSKL+ D +P+A++E E+KN+FGR+IA+DASMS+YQF+IA++ +G +L +
Sbjct: 1 MGILGLSKLLYDKSPNAIREQELKNFFGRRIAVDASMSIYQFIIAMKGFQDGQGLELTNE 60
Query: 322 DGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
G+ TSHL G F RT+R+++ GIKP+YVFDGKPP +KA +L +KA +
Sbjct: 61 KGDVTSHLNGLFARTLRMIDEGIKPIYVFDGKPPKLKADELEMRRQKAAEAERAFEKAKD 120
Query: 502 AGDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
AGD ++K ++R V+V++ +E+K+LL+LMG+ ++ P
Sbjct: 121 AGDDEMMEKMSKRTVRVSRDQIDESKKLLRLMGIPVIQAP 160
>UniRef50_UPI000049A186 Cluster: FEN-1 nuclease; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: FEN-1 nuclease - Entamoeba
histolytica HM-1:IMSS
Length = 376
Score = 161 bits (392), Expect = 1e-38
Identities = 80/151 (52%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVR-SEGAQLVSVDGE 330
MGI GLSKL+A AP ++KE +I Y GR IAIDAS+ +YQF+ AVR + GA +V GE
Sbjct: 1 MGIKGLSKLLARYAPKSMKEGKIDQYSGRVIAIDASILVYQFISAVRDTTGATMVDEFGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TTSH++GTFYRTI+L+E+GIKP+YVFDGKPP+MK +L+ L KA E GD
Sbjct: 61 TTSHIIGTFYRTIKLIESGIKPIYVFDGKPPEMKDGELHKRKENAQKAQEQLDKALEEGD 120
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGV 603
K +R ++TK+ S+E K+LL+LMG+
Sbjct: 121 KEQAKKLMKRTARMTKEQSDEVKKLLQLMGI 151
>UniRef50_A7F0Q6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 387
Score = 159 bits (385), Expect = 7e-38
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 12/178 (6%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFG------------RKIAIDASMSLYQFLIAVRS 297
MGI L +I D AP AVKE EIKN FG +K+ SMS+Y FLIAVRS
Sbjct: 1 MGIKQLMAIIKDEAPDAVKEGEIKNQFGCVCTFDVDLYRFQKLIPTRSMSIYSFLIAVRS 60
Query: 298 EGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXX 477
G L + +GETTSHLMG FYRT+R+V+NGIKPVYVFDG PP +K+ +L
Sbjct: 61 GGEMLTNEEGETTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKATAT 120
Query: 478 XXLQKATEAGDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
L++A E G ++KF+RR V+VT++H+ E ++LLKLMG+ ++ P + +L
Sbjct: 121 EGLEEAKETGTAEDIEKFSRRTVRVTREHNAECQKLLKLMGIPFIIAPTEAEAQCAVL 178
>UniRef50_Q9U0K1 Cluster: Flap endonuclease 1; n=10; Eukaryota|Rep:
Flap endonuclease 1 - Plasmodium falciparum
Length = 672
Score = 158 bits (384), Expect = 9e-38
Identities = 78/158 (49%), Positives = 109/158 (68%), Gaps = 2/158 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS--EGAQLVSVDG 327
MGI GL+K IAD AP+A+KE++I++ GR IAIDASMSLYQF+IA+R + L + G
Sbjct: 1 MGIKGLTKFIADAAPNAIKEIKIESLMGRIIAIDASMSLYQFIIAIRDSEQYGNLTNESG 60
Query: 328 ETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAG 507
ETTSH+ G R+IRL+ENG+KP+YVFDG PP++K +L L+KA E G
Sbjct: 61 ETTSHISGLMSRSIRLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEG 120
Query: 508 DTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
+ + K + R V+VT++ +EEAK+LL LMG+ ++ P
Sbjct: 121 NLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPIIEAP 158
Score = 34.3 bits (75), Expect = 2.6
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
G P+++APCEAE+QCA L
Sbjct: 151 GIPIIEAPCEAESQCAFL 168
>UniRef50_Q75LI2 Cluster: Flap endonuclease 1b; n=8;
Magnoliophyta|Rep: Flap endonuclease 1b - Oryza sativa
subsp. japonica (Rice)
Length = 412
Score = 156 bits (378), Expect = 5e-37
Identities = 75/157 (47%), Positives = 107/157 (68%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVD-GE 330
MGI GL+KL+A+ AP A +++Y GR +AID S+S+YQFLI V +G ++++ + GE
Sbjct: 1 MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDTSLSIYQFLIVVGRKGTEVLTNEAGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TSHL G RT+R++E GIKPV+VFDG+PPDMK +L L +A E GD
Sbjct: 61 VTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEVGD 120
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
++KF++R VKVTK+H+E+ K+LL LMGV ++ P
Sbjct: 121 EDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAP 157
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
G PVV AP EAEAQCAAL
Sbjct: 150 GVPVVQAPGEAEAQCAAL 167
>UniRef50_Q4TAK8 Cluster: Chromosome undetermined SCAF7301, whole
genome shotgun sequence; n=4; Euteleostomi|Rep:
Chromosome undetermined SCAF7301, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 380
Score = 151 bits (365), Expect = 2e-35
Identities = 70/96 (72%), Positives = 83/96 (86%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD AP A+KE +I+NYFGRKIAIDASM +YQFLIAVR +G L + DGET
Sbjct: 1 MGIHGLAKLIADQAPGAIKEQDIRNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQ 441
TSHLMG FYRTIR++E+GIKPVYVFDGKPP +K+ +
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSSE 96
>UniRef50_Q54NU0 Cluster: XPG; n=1; Dictyostelium discoideum
AX4|Rep: XPG - Dictyostelium discoideum AX4
Length = 384
Score = 147 bits (357), Expect = 2e-34
Identities = 76/157 (48%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSE-GAQLVSVDGE 330
MGI L+ LI D AP ++K +KNYFGR IAIDAS SLYQFLIA+ ++ + L + GE
Sbjct: 1 MGIKKLTDLIEDNAPTSIKTNILKNYFGRIIAIDASTSLYQFLIAMNADVSSALTNQLGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TTSHL G FYRTI+L+ GIKP+YVFDG P +K+ +L L++ATE G
Sbjct: 61 TTSHLQGMFYRTIKLISRGIKPIYVFDGSAPVLKSGELAKRQARRKEAKENLKEATEVGT 120
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
V KF +R++ VT++ +E+ +LL LMGV ++ P
Sbjct: 121 NEEVQKFAKRVITVTRKQNEDCIKLLTLMGVPIVKAP 157
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
G P+V APCEAEAQCA +
Sbjct: 150 GVPIVKAPCEAEAQCAEI 167
>UniRef50_Q8SS91 Cluster: STRUCTURE-SPECIFIC ENDONUCLEASE OF THE
XPG/RAD2 FAMILY; n=3; Eukaryota|Rep: STRUCTURE-SPECIFIC
ENDONUCLEASE OF THE XPG/RAD2 FAMILY - Encephalitozoon
cuniculi
Length = 345
Score = 140 bits (339), Expect = 3e-32
Identities = 72/150 (48%), Positives = 98/150 (65%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI LSKL+ + + ++E + Y +K+AIDASMS+YQFLIAVRS GA L + D T
Sbjct: 1 MGIKQLSKLLRENSKRGIRERPLVYYSSKKVAIDASMSMYQFLIAVRSGGATLGNEDSPT 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
SHL+G FYRTIR+VE GI PVYVFDG PP++K +L ++A+E GD
Sbjct: 61 -SHLVGFFYRTIRMVELGITPVYVFDGVPPEIKMKELEKRKERRAAADREYREASEVGDK 119
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGV 603
++ +++R KVT H +E K+LL LMG+
Sbjct: 120 ELMEMYDKRKTKVTGVHVDECKRLLGLMGI 149
>UniRef50_Q013G9 Cluster: FEN-1; n=1; Ostreococcus tauri|Rep: FEN-1
- Ostreococcus tauri
Length = 428
Score = 139 bits (337), Expect = 5e-32
Identities = 70/151 (46%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQ-LVSVDGE 330
MGI GL+ L+++ AP A++E + +Y R++AIDASM +YQF+IAV G Q L + GE
Sbjct: 40 MGIKGLTALLSENAPGAMREQKFTSYLDRRVAIDASMHIYQFMIAVGRTGEQTLTNEAGE 99
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TSHL G RT R++E GIKPVYVFDGKPP MK +L L+ A EAG+
Sbjct: 100 VTSHLQGMLMRTSRMLEAGIKPVYVFDGKPPTMKGGELAKRKDKREEAEAALKAAREAGN 159
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGV 603
V+K ++R V+V+K+ S E +L +L+G+
Sbjct: 160 QEEVEKLSKRTVRVSKEQSMEVMKLAQLLGI 190
Score = 33.1 bits (72), Expect = 5.9
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 588 QIDGCPVVDAPCEAEAQCAAL 650
Q+ G P +APCEAEA CAA+
Sbjct: 186 QLLGIPAFEAPCEAEATCAAM 206
>UniRef50_A2GNP0 Cluster: XPG I-region family protein; n=1;
Trichomonas vaginalis G3|Rep: XPG I-region family
protein - Trichomonas vaginalis G3
Length = 335
Score = 136 bits (330), Expect = 3e-31
Identities = 64/119 (53%), Positives = 83/119 (69%)
Frame = +1
Query: 247 AIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPD 426
AIDAS+S+YQFL++VR G QLV +G TTSHL G RT+RL+E+G+KPVYVFDGKPP+
Sbjct: 1 AIDASLSIYQFLVSVRHTGQQLVDSEGNTTSHLQGVLSRTVRLIESGVKPVYVFDGKPPE 60
Query: 427 MKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGV 603
MK +L L+KA E+GD ++DKF+RR V + K EE KQLL+ +GV
Sbjct: 61 MKGAELAKRLERREEAQKELEKAIESGDQEAIDKFSRRTVHLDKTQVEECKQLLECLGV 119
Score = 37.1 bits (82), Expect = 0.36
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
G P VDAPCEAEA+CAAL
Sbjct: 118 GVPYVDAPCEAEAECAAL 135
>UniRef50_Q4A3A7 Cluster: Putative endonuclease; n=1; Emiliania
huxleyi virus 86|Rep: Putative endonuclease - Emiliania
huxleyi virus 86
Length = 358
Score = 135 bits (327), Expect = 8e-31
Identities = 73/157 (46%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS-EGAQLVSVDGE 330
MGI GLS+LI + A + ++ G+ I IDASM +YQ LIA+R QL + +GE
Sbjct: 1 MGINGLSRLINNKAHNGTSNKDLDLLSGKVIMIDASMQIYQCLIAIRQGPSGQLAACEGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TSHL G FYRTIRL+E GIKPVYVFDGKPP +K +L+ L K T+ D
Sbjct: 61 VTSHLTGIFYRTIRLIEAGIKPVYVFDGKPPVLKKKELDKRNERQAQALSEL-KLTD--D 117
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
V+K +R V+ T++HSEE K++L LMG+ ++ P
Sbjct: 118 ATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVVQAP 154
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAA 647
G PVV APCEAEA CAA
Sbjct: 147 GIPVVQAPCEAEATCAA 163
>UniRef50_Q7R289 Cluster: GLP_422_59630_60715; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_422_59630_60715 - Giardia lamblia
ATCC 50803
Length = 361
Score = 135 bits (327), Expect = 8e-31
Identities = 68/151 (45%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS-EGAQLVSVDGE 330
MGI GL+KLI ++AP AV + I++Y + IAIDAS+ LYQF+ + S +G L + GE
Sbjct: 1 MGIRGLAKLIEEVAPAAVSKRLIQHYCNKVIAIDASVMLYQFITTITSGDGTALANSSGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TSHL+G + IRL E GIKP++VFDGKPP+ K +L QKA E G+
Sbjct: 61 VTSHLVGLLAKVIRLAEAGIKPIFVFDGKPPEDKQGELEKRRQAREAAELEQQKAEEEGN 120
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGV 603
+ +RR VKVT+QH ++A++LL +G+
Sbjct: 121 LERAKQLSRRTVKVTQQHCKQAERLLDTLGI 151
>UniRef50_A3FPN7 Cluster: Flap endonuclease 1; n=2;
Cryptosporidium|Rep: Flap endonuclease 1 -
Cryptosporidium parvum Iowa II
Length = 490
Score = 133 bits (321), Expect = 4e-30
Identities = 70/159 (44%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQ---LVSVD 324
MGI GL+K +AD AP ++++ I + G+++AIDASM +YQFL A+R EG+Q L +
Sbjct: 1 MGIKGLTKFLADNAPKSIQQQGIGSLLGKRVAIDASMWIYQFLAAIR-EGSQWGNLTNSS 59
Query: 325 GETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEA 504
GE+TSH+ G RT RL+E GIKPV+VFDG PP+MK +L L+KA E
Sbjct: 60 GESTSHINGMLSRTTRLLEAGIKPVFVFDGAPPEMKKDELTKRDERREKALAELEKAQEI 119
Query: 505 GDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
GD + K + R + VTK+ E+ K+LL +G+ + P
Sbjct: 120 GDEELIKKQSVRTIHVTKKQVEDVKKLLGFLGMPCIDAP 158
>UniRef50_A7AX58 Cluster: XPG N-terminal domain and XPG I-region
domain containing protein; n=1; Babesia bovis|Rep: XPG
N-terminal domain and XPG I-region domain containing
protein - Babesia bovis
Length = 672
Score = 124 bits (299), Expect = 2e-27
Identities = 66/156 (42%), Positives = 98/156 (62%), Gaps = 3/156 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVD--- 324
MGI GL ++D AP + E+ +++ G IAIDAS +LYQF IA+R EG+ L S+
Sbjct: 1 MGIKGLIGFLSDAAPGCISEVTLESLSGTSIAIDASTALYQFTIAIR-EGSYLSSLTNSK 59
Query: 325 GETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEA 504
GE+TSH+ G R IRL+E GI+PV+VFD PP+ K+ L L+KA E
Sbjct: 60 GESTSHIAGLLNRCIRLLELGIRPVFVFDSTPPEAKSQTLAKRKLLREEAESSLEKAIEE 119
Query: 505 GDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLL 612
D ++ K+ R V++T++ +E AK+LL+L+GV ++
Sbjct: 120 DDKEAIRKYVGRTVRITQKENESAKKLLRLVGVPVI 155
>UniRef50_Q4UFP0 Cluster: 5'-3' exonuclease, putative; n=2;
Theileria|Rep: 5'-3' exonuclease, putative - Theileria
annulata
Length = 506
Score = 123 bits (297), Expect = 3e-27
Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEG--AQLVSVDG 327
MGI GL +++ P ++ E+ ++ G +AIDAS +LYQF IA+R + LV+ G
Sbjct: 1 MGIKGLIPFLSEKVPSSISELSLECLSGESLAIDASAALYQFTIAIRDSSYFSSLVNSKG 60
Query: 328 ETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAG 507
E+TSH+ G R +L+E GIKPV+VFD KPP++K+ L+ +KA G
Sbjct: 61 ESTSHIYGLMNRCSKLLEYGIKPVFVFDSKPPELKSKTLDKRRQKREEAKTDFKKAISEG 120
Query: 508 DTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLL 612
D S K R VKVTK ++ AK+LL+LMG+ ++
Sbjct: 121 DKESAKKLVGRTVKVTKDMNDSAKKLLRLMGIPVI 155
>UniRef50_Q75DS8 Cluster: ABL052Cp; n=1; Eremothecium gossypii|Rep:
ABL052Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 379
Score = 123 bits (296), Expect = 4e-27
Identities = 58/95 (61%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVR-SEGAQLVSVDGE 330
MGI GL+ +I P A++ E+K +FGR++AIDASMSLYQFLIAVR ++G QL S DGE
Sbjct: 1 MGIKGLNSIIQQQVPSAIRPREMKQFFGRRVAIDASMSLYQFLIAVRQADGVQLASADGE 60
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
TTSHLMG FYRT+ +V++G+KP YVFDG +KA
Sbjct: 61 TTSHLMGMFYRTLWMVDHGLKPCYVFDGSRRCLKA 95
>UniRef50_Q976H6 Cluster: Flap structure-specific endonuclease;
n=25; Archaea|Rep: Flap structure-specific endonuclease
- Sulfolobus tokodaii
Length = 351
Score = 118 bits (285), Expect = 9e-26
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
Frame = +1
Query: 181 IADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS-EGAQLVSVDGETTSHLMGTF 357
+A++ KE+ G+KI+IDA +LYQFL A+R +G L+ G TSHL G F
Sbjct: 3 LAELVEEIKKELSFAELKGKKISIDAYNALYQFLAAIRQPDGTPLMDSQGRVTSHLNGLF 62
Query: 358 YRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD--TASVDKF 531
YRTI ++E GI P+YVFDGKPP+ KA +L L++A G T+ + K+
Sbjct: 63 YRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGSIKTSELKKY 122
Query: 532 NRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
+ +++T + +EE+K+LLK MG+ ++ P
Sbjct: 123 AQMSIRLTNEMAEESKELLKAMGIPVVQAP 152
>UniRef50_P61942 Cluster: Flap structure-specific endonuclease; n=8;
Archaea|Rep: Flap structure-specific endonuclease -
Nanoarchaeum equitans
Length = 339
Score = 112 bits (269), Expect = 8e-24
Identities = 59/147 (40%), Positives = 80/147 (54%)
Frame = +1
Query: 181 IADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFY 360
+ +I KE+E K FG+ IAIDA +LYQFL ++R +G L G TSHL G FY
Sbjct: 5 LKEIVDPVKKEIEFKQLFGKVIAIDAFNALYQFLFSIRQDGEPLRDSKGRITSHLSGLFY 64
Query: 361 RTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRR 540
RTI L+E GIKP+YVFDG PP K ++A + G+ K+ +
Sbjct: 65 RTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQLESKYKEALKKGNIQEAIKYAKS 124
Query: 541 LVKVTKQHSEEAKQLLKLMGVRLLMHP 621
L K+ EEAK+LL+ MG+ + P
Sbjct: 125 LGKLDSYMVEEAKKLLEAMGIPYVQAP 151
>UniRef50_A0CXT3 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_30, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 390
Score = 109 bits (262), Expect = 6e-23
Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGA----QLVSV 321
MGI L + + + AP+ + + + + GR I DASM++YQFLI +S G +L
Sbjct: 1 MGIHQLMQFLKEKAPNCFRTLMLDYFAGRTIGCDASMAMYQFLIQTQSAGQTQIIELTDK 60
Query: 322 DGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
DG T HL+G F RT++ +ENGIKPV+VFDGKPP +K+ +L + A E
Sbjct: 61 DGNRTGHLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLKEEAQVKTELALE 120
Query: 502 AGDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
GD ++R ++ E+A ++LKLMG +++ P
Sbjct: 121 QGDMQQALLQHQRTTTISSVMKEDAIKMLKLMGCPVIIAP 160
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
GCPV+ APCEAEAQCA L
Sbjct: 153 GCPVIIAPCEAEAQCAEL 170
>UniRef50_Q8PYF6 Cluster: Flap structure-specific endonuclease; n=7;
Euryarchaeota|Rep: Flap structure-specific endonuclease
- Methanosarcina mazei (Methanosarcina frisia)
Length = 338
Score = 102 bits (244), Expect = 9e-21
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +1
Query: 208 KEMEIKNYFGRKIAIDASMSLYQFLIAVRS-EGAQLVSVDGETTSHLMGTFYRTIRLVEN 384
+++E+ + R +A+DA +L+QFL +R +G+ LV+ G+ TSHL G YRT LVE
Sbjct: 12 RKIELSDLSNRVVAVDAFNTLHQFLSIIRQRDGSPLVNSQGKVTSHLSGLLYRTASLVEA 71
Query: 385 GIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQH 564
GIKPV+VFDGKPP+MK LN + A G+ + K+ + KV +
Sbjct: 72 GIKPVFVFDGKPPEMKTGTLNRRKEIRESSKEKWENAKAEGNLEAAYKYAQASSKVDQDI 131
Query: 565 SEEAKQLLKLMGVRLLMHP 621
E++K LL +MG+ + P
Sbjct: 132 IEDSKYLLDIMGIPWIQAP 150
>UniRef50_Q6L2I9 Cluster: Flap structure-specific endonuclease; n=7;
Thermoplasmatales|Rep: Flap structure-specific
endonuclease - Picrophilus torridus
Length = 338
Score = 97.5 bits (232), Expect = 2e-19
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = +1
Query: 211 EMEIKNYFGRKIAIDASMSLYQFLIAVRSE-GAQLVSVDGETTSHLMGTFYRTIRLVENG 387
E +K+ G +++DA +YQFL ++R + G L +G TSHL G FYRT L+EN
Sbjct: 13 ETSLKDNSGSIVSVDAYNIIYQFLSSIRGDDGEPLKDSNGNITSHLSGIFYRTSNLLENN 72
Query: 388 IKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHS 567
IKPVYVFDGKP +K+ L L++A + D A + + R+ +T
Sbjct: 73 IKPVYVFDGKPFHLKSETLRERSLIKEKNIMKLEEAIASNDDAKIRSLSSRINYITDDIV 132
Query: 568 EEAKQLLKLMGVRLLMHP 621
E+K LL LMG+ + P
Sbjct: 133 NESKTLLNLMGLPYVQAP 150
>UniRef50_UPI0000E488A6 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 277
Score = 93.5 bits (222), Expect = 4e-18
Identities = 40/61 (65%), Positives = 53/61 (86%)
Frame = +1
Query: 238 RKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGK 417
RK+AIDASM +YQFLIAVR +G+ L + +GETTSHLMG FYRTIR++E+G+KP++VF+
Sbjct: 20 RKVAIDASMCIYQFLIAVRQDGSVLTNEEGETTSHLMGIFYRTIRMIEHGLKPLFVFNSL 79
Query: 418 P 420
P
Sbjct: 80 P 80
>UniRef50_Q2NFD4 Cluster: Flap structure-specific endonuclease; n=2;
Methanobacteriaceae|Rep: Flap structure-specific
endonuclease - Methanosphaera stadtmanae (strain DSM
3091)
Length = 328
Score = 91.9 bits (218), Expect = 1e-17
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = +1
Query: 214 MEIKNYFGRKIAIDASMSLYQFLIAVR-SEGAQLVSVDGETTSHLMGTFYRTIRLVENGI 390
+E+K G+ + +DAS +Y+FL ++R ++G L ++G TSHL G ++T L+E I
Sbjct: 14 IEMKELEGKILTVDASNVIYKFLSSMRQTDGTPLRDLNGHITSHLNGIMFQTSTLIEKDI 73
Query: 391 KPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHSE 570
KPVYVFDGK PD+K +A E GD + K+ R + K+ +
Sbjct: 74 KPVYVFDGKAPDLKKETQEERINIKKESEKKYLEAKEVGDVVAARKYAARTTHLNKEIIK 133
Query: 571 EAKQLLKLMGV 603
+K+LL LMG+
Sbjct: 134 SSKKLLDLMGI 144
>UniRef50_A0RU95 Cluster: 5'-3' exonuclease; n=2; Thermoprotei|Rep:
5'-3' exonuclease - Cenarchaeum symbiosum
Length = 340
Score = 90.2 bits (214), Expect = 4e-17
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = +1
Query: 220 IKNYFGRKIAIDASMSLYQFLIAVRS-EGAQLVSVDGETTSHLMGTFYRTIRLVENGIKP 396
++++ + +AIDA ++YQFL +R +G QL G TSHL G YR + GIKP
Sbjct: 16 LESFATKVVAIDAYNAIYQFLATIRGPDGMQLTDARGRVTSHLSGLLYRNASFLSMGIKP 75
Query: 397 VYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHSEEA 576
VYVFDG+PP +K+ ++ A +AG+ K+ ++ + +++
Sbjct: 76 VYVFDGRPPTLKSAEIERRRNVKKGAAVKYAAAVDAGNMDDARKYAQQTTSMRDGMVDDS 135
Query: 577 KQLLKLMGVRLLMHP 621
KQ+LKL G+ + P
Sbjct: 136 KQILKLFGIPYIDAP 150
>UniRef50_Q58839 Cluster: Flap structure-specific endonuclease; n=6;
Methanococcales|Rep: Flap structure-specific
endonuclease - Methanococcus jannaschii
Length = 326
Score = 89.0 bits (211), Expect = 9e-17
Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = +1
Query: 235 GRKIAIDASMSLYQFLIAVR-SEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFD 411
G+K+AID +LYQFL ++R +G+ L + GE TS G FY+TI L+EN I P++VFD
Sbjct: 21 GKKVAIDGMNALYQFLTSIRLRDGSPLRNRKGEITSAYNGVFYKTIHLLENDITPIWVFD 80
Query: 412 GKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHSEEAKQLLK 591
G+PP +K +++A + D K+ +R+ +T + E K LL
Sbjct: 81 GEPPKLKEKTRKVRREMKEKAELKMKEAIKKEDFEEAAKYAKRVSYLTPKMVENCKYLLS 140
Query: 592 LMGVRLLMHP 621
LMG+ + P
Sbjct: 141 LMGIPYVEAP 150
>UniRef50_A2SQC6 Cluster: XPG I; n=5; Archaea|Rep: XPG I -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 333
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = +1
Query: 247 AIDASMSLYQFLIAVR-SEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPP 423
A+DA +LYQFL +R ++GA L+ G TSHL G +R L+E I P+YVFDGKPP
Sbjct: 26 AVDAFNALYQFLSGIRQADGAPLMDGQGRITSHLSGLLFRNANLIEKNITPIYVFDGKPP 85
Query: 424 DMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGV 603
KA L+ +KA + GD S K+ K+ + +K+LL +G+
Sbjct: 86 VFKASTLSKRREVRENAADAWEKALKEGDEESARKYAMASSKIDAFIIDSSKELLSALGI 145
Query: 604 RLLMHP 621
+ P
Sbjct: 146 AWIQAP 151
>UniRef50_Q5UQW7 Cluster: Putative endonuclease L386; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Putative
endonuclease L386 - Mimivirus
Length = 473
Score = 70.9 bits (166), Expect = 2e-11
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +1
Query: 235 GRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDG 414
G +AIDAS+++Y+ + G LV+ +G+ TSHL G FY + ++N I P+YVFDG
Sbjct: 51 GITVAIDASLAIYRMVYGKLKSGPSLVNREGKLTSHLRGIFYNVLTFLQNDIIPIYVFDG 110
Query: 415 KPPDMKA 435
K PD+K+
Sbjct: 111 KAPDIKS 117
>UniRef50_Q4P7L5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1532
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/98 (33%), Positives = 63/98 (64%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+ +A + ++I+ G+++AID+S+ LY F +A+R + + +S
Sbjct: 1 MGVQGLWQLLQPVA----RPIKIETLEGKRLAIDSSLWLYHFQMAMRDKDGRTLS----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLN 447
+H++G +R ++L+ +G++PV+VFDG P MK L+
Sbjct: 52 NAHILGFLWRILKLLFHGVRPVFVFDGGAPAMKRKTLS 89
>UniRef50_A1RXA5 Cluster: XPG I; n=1; Thermofilum pendens Hrk 5|Rep:
XPG I - Thermofilum pendens (strain Hrk 5)
Length = 341
Score = 64.9 bits (151), Expect = 2e-09
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Frame = +1
Query: 208 KEMEIKNYFGRKIAIDASMSLYQFLIAVRSE-GAQLVSVDGETTSHLMGTFYRTIRLV-E 381
K++ ++ GR +A+DA S+YQFL VR E G + GE TSHL+G R RL E
Sbjct: 12 KKIGLQGVRGRVLAVDALNSVYQFLALVRDERGMLFTNSRGEVTSHLIGLLSRYSRLAYE 71
Query: 382 NGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLV--KVT 555
++VFDG P +KA +L + GD F++ +V +V
Sbjct: 72 YDASFIFVFDGSPHPLKARELEKRKKQREKAKQEYAELLSKGDLRKA--FSKAVVSAEVD 129
Query: 556 KQHSEEAKQLLKLMG 600
+ E K+L++LMG
Sbjct: 130 DRIVESTKRLVRLMG 144
>UniRef50_P28706 Cluster: DNA-repair protein rad13; n=1;
Schizosaccharomyces pombe|Rep: DNA-repair protein rad13
- Schizosaccharomyces pombe (Fission yeast)
Length = 1112
Score = 62.9 bits (146), Expect = 6e-09
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS-EGAQLVSVDGE 330
MG+ GL DI + ++++ +++AIDAS+ +YQFL AVR EG QL S
Sbjct: 1 MGVSGLW----DILEPVKRPVKLETLVNKRLAIDASIWIYQFLKAVRDKEGNQLKS---- 52
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
SH++G F R +L+ GIKPV+VFDG P +K
Sbjct: 53 --SHVVGFFRRICKLLFFGIKPVFVFDGGAPSLK 84
>UniRef50_Q6C8E7 Cluster: Similar to sp|P28706 Schizosaccharomyces
pombe DNA repair protein rad13; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P28706 Schizosaccharomyces
pombe DNA repair protein rad13 - Yarrowia lipolytica
(Candida lipolytica)
Length = 1115
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/93 (37%), Positives = 58/93 (62%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +++ A + ++++ G ++A+DAS+ +YQFL R GA G+
Sbjct: 1 MGVRGLWEIVQSTA----RPVKVETLGGNRLAVDASIWIYQFLKTTR--GA------GKK 48
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+HL+G F R ++L+ GIKPV+VFDG P++K
Sbjct: 49 NAHLVGFFRRILKLLFLGIKPVFVFDGVAPELK 81
>UniRef50_Q5KPE3 Cluster: Single-stranded DNA specific
endodeoxyribonuclease, putative; n=2; Filobasidiella
neoformans|Rep: Single-stranded DNA specific
endodeoxyribonuclease, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1323
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/95 (34%), Positives = 59/95 (62%)
Frame = +1
Query: 148 IKMGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDG 327
I MG+ GL L+ +A + ++I++ G+++AID+S+ LYQF +R + +++
Sbjct: 63 INMGVKGLWSLLNPVA----RPVQIESMEGKRLAIDSSIWLYQFQATMRDKDGRVL---- 114
Query: 328 ETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+H++G R +L+ +GIKPV+VFDG P +K
Sbjct: 115 -VNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALK 148
>UniRef50_A0E7S1 Cluster: Chromosome undetermined scaffold_81, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_81,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 872
Score = 60.1 bits (139), Expect = 5e-08
Identities = 44/145 (30%), Positives = 72/145 (49%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ L KL+A A + ++I + G ++AID S+ + + L + + G +V
Sbjct: 1 MGVYNLWKLLAA----AGRNIDIASLRGLRVAIDVSIWMIKLLHGMSNSGVNFENV---- 52
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
HL+G R + L+ENGIKPV+VFDG P++K L LQK E
Sbjct: 53 --HLIGILKRIMFLLENGIKPVFVFDGPAPELKRQTLIKRAQQRQQYNINLQKLAE---- 106
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLL 588
V K + +T+Q+ E ++++
Sbjct: 107 KYVVKLIEKGYDITQQNQELIEEIV 131
>UniRef50_Q6FTW3 Cluster: Candida glabrata strain CBS138 chromosome
F complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome F complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 992
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +1
Query: 187 DIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRT 366
DI K + +++ R++A+DAS+ +YQFL AVR + + ++H+ G F R
Sbjct: 8 DIVGPTAKPVRLESLHDRRMAVDASIWIYQFLKAVRDKEGNAIK-----SAHITGFFRRV 62
Query: 367 IRLVENGIKPVYVFDGKPPDMK 432
+L+ GIKPV+VFDG P +K
Sbjct: 63 CKLLYFGIKPVFVFDGGVPVLK 84
>UniRef50_Q9HQ27 Cluster: Flap structure-specific endonuclease; n=6;
Halobacteriaceae|Rep: Flap structure-specific
endonuclease - Halobacterium salinarium (Halobacterium
halobium)
Length = 327
Score = 59.3 bits (137), Expect = 8e-08
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Frame = +1
Query: 202 AVKEMEIKNYFGRKIAIDASMSLYQFLIA-VRSEGAQLVSV-DGETTSHLMGTFYRTIRL 375
A++E + G +A+DA LY++L V+ GA + + DG ++L+G +
Sbjct: 11 AIEETPFADLEGSVVAVDAHNWLYKYLTTTVQWTGADVYTTSDGTEVANLVGAVQGLPKF 70
Query: 376 VENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVT 555
E+G+ PV+V+DG ++K ++ L A EAGD A + + R ++T
Sbjct: 71 FEHGLTPVFVWDGGVTELKDDEIADRREQRERYEEQLDDAREAGDAAEAARLDARTQRLT 130
Query: 556 KQHSEEAKQLLKLMGV 603
E ++L L+ +
Sbjct: 131 PTIHETTRELFDLLDI 146
>UniRef50_Q6CXC7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome A of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 1011
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/86 (36%), Positives = 52/86 (60%)
Frame = +1
Query: 187 DIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRT 366
DI K + +++ R++A+DAS+ +YQFL A+R++ D +H++G F R
Sbjct: 8 DIVSPVAKPVRLESLNERRMAVDASIWIYQFLKAMRNKEG-----DALRNAHIIGFFRRI 62
Query: 367 IRLVENGIKPVYVFDGKPPDMKAHQL 444
+L+ GIKPV+VFDG P +K + +
Sbjct: 63 CKLLYYGIKPVFVFDGGVPVLKLNTI 88
>UniRef50_A7PMD6 Cluster: Chromosome chr14 scaffold_21, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_21, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1066
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+A + + + ++ G+++AIDAS+ + QF+ A+R E ++V
Sbjct: 1 MGVHGLWELLAPVG----RRVSVETLAGKRLAIDASIWMIQFMKAMRDEKGEMVR----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
HL+G F R +L+ KPV+VFDG P +K
Sbjct: 52 NGHLLGFFRRICKLLFLRTKPVFVFDGGTPALK 84
>UniRef50_A3LTL9 Cluster: Predicted protein; n=2;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 992
Score = 58.4 bits (135), Expect = 1e-07
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVR-SEGAQLVSVDGETTS 339
+G++ L + P A + + ++ +K+A+DAS+ +YQFL AVR SEG L S
Sbjct: 1 MGVNSLWDIVGPTA-RPVRLEALSRKKLAVDASIWIYQFLKAVRDSEGNSLPQ------S 53
Query: 340 HLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLN 447
H++G F R +L+ GI P++VFDG P +K +N
Sbjct: 54 HIVGFFRRICKLLYFGIFPIFVFDGGAPALKRETIN 89
>UniRef50_A6R130 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 1111
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL ++ A + ++I+ +++A+DAS+ +YQFL AVR + +
Sbjct: 1 MGVTGLWTVVKPCA----RPIKIETLNRKRLAVDASIWIYQFLKAVRDKEGNALR----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+H++G F R +L+ GIKPV+VFDG P +K
Sbjct: 52 NAHIVGFFQRICKLLYFGIKPVFVFDGGAPTLK 84
>UniRef50_P07276 Cluster: DNA-repair protein RAD2; n=3;
Saccharomyces cerevisiae|Rep: DNA-repair protein RAD2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1031
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +1
Query: 187 DIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRT 366
DIA + + +++ +++A+DAS+ +YQFL AVR + V SH+ G F R
Sbjct: 8 DIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQEGNAVK-----NSHITGFFRRI 62
Query: 367 IRLVENGIKPVYVFDGKPPDMK 432
+L+ GI+PV+VFDG P +K
Sbjct: 63 CKLLYFGIRPVFVFDGGVPVLK 84
>UniRef50_A7TT55 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1037
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +1
Query: 187 DIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRT 366
DI + + +++ +K+A+DAS+ +YQFL AVR V +H++G F R
Sbjct: 8 DILGPTARPVRLESLHDQKMAVDASIWIYQFLKAVRDNKGNAVK-----DAHIVGFFRRI 62
Query: 367 IRLVENGIKPVYVFDGKPPDMK 432
+L+ GIKPV+VFDG P +K
Sbjct: 63 CKLLFYGIKPVFVFDGGVPALK 84
>UniRef50_UPI00006CAA8D Cluster: XPG N-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: XPG
N-terminal domain containing protein - Tetrahymena
thermophila SB210
Length = 1113
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL L++ A ++++++ G+++AID S+ + + L S ++ E
Sbjct: 1 MGVQGLWTLLSP----AGRKLKVEALEGQRLAIDVSIWVIRMLYGFASR-----RMNSEF 51
Query: 334 TS-HLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQL 444
+ HL+G F R RL+ GIKPV+VFDGK P++K H L
Sbjct: 52 KNIHLVGIFKRLCRLLSLGIKPVFVFDGKAPELKRHTL 89
>UniRef50_A5DGX2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1035
Score = 56.8 bits (131), Expect = 4e-07
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVR-SEGAQLVSVDGETTS 339
+G++ L + P A + + +++ +K+A+DAS+ +YQFL AVR S+G L S
Sbjct: 1 MGVNSLWDIVGPTA-RPVRLESLSRKKLAVDASIWIYQFLKAVRDSDGNSLPQ------S 53
Query: 340 HLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
H++G F R +L+ GI PV+VFDG P +K
Sbjct: 54 HIVGFFRRICKLLYFGILPVFVFDGGAPALK 84
>UniRef50_A1CT40 Cluster: DNA excision repair protein Rad2; n=8;
Eurotiomycetidae|Rep: DNA excision repair protein Rad2 -
Aspergillus clavatus
Length = 1140
Score = 56.8 bits (131), Expect = 4e-07
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL ++ A + ++++ +++A+DAS+ +YQFL AVR + +
Sbjct: 1 MGVTGLWTVVQPCA----RPIKLETLNKKRLAVDASIWIYQFLKAVRDKEGNALR----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
SH++G F R +L+ GIKPV+VFDG P +K
Sbjct: 52 NSHVVGFFRRICKLLYFGIKPVFVFDGGAPVLK 84
>UniRef50_A5E4G0 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1129
Score = 56.4 bits (130), Expect = 6e-07
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 187 DIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS-EGAQLVSVDGETTSHLMGTFYR 363
DI + + + ++ +K+A+DAS+ +YQFL AVR EG L S SH++G F R
Sbjct: 8 DIVGPSARPVRLEALSRKKLAVDASIWIYQFLKAVRDKEGNALQS------SHIVGFFRR 61
Query: 364 TIRLVENGIKPVYVFDGKPPDMK 432
+L+ GI+P++VFDG P +K
Sbjct: 62 ICKLLFFGIRPIFVFDGGVPVLK 84
>UniRef50_Q5CF23 Cluster: RAD2; n=3; Cryptosporidium|Rep: RAD2 -
Cryptosporidium hominis
Length = 1158
Score = 56.0 bits (129), Expect = 7e-07
Identities = 35/97 (36%), Positives = 56/97 (57%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL ++A P ++ + + G+ +AIDAS+ L QFL+ ++ + ++
Sbjct: 1 MGVKGLWDIVA---PSGIR-VRPETLEGQILAIDASIWLKQFLMGLKDKEGKIPQ----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQL 444
+HL+G F R +L+ GI PV VFDG PPD+K L
Sbjct: 52 GAHLLGFFKRLCKLLYYGILPVIVFDGTPPDIKKRTL 88
>UniRef50_Q9ATY5 Cluster: DNA-repair protein UVH3; n=1; Arabidopsis
thaliana|Rep: DNA-repair protein UVH3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1479
Score = 56.0 bits (129), Expect = 7e-07
Identities = 31/93 (33%), Positives = 54/93 (58%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+A + + + ++ +++AIDAS+ + QF+ A+R E +V
Sbjct: 1 MGVQGLWELLAPVG----RRVSVETLANKRLAIDASIWMVQFIKAMRDEKGDMVQ----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+HL+G F R +L+ KP++VFDG P +K
Sbjct: 52 NAHLIGFFRRICKLLFLRTKPIFVFDGATPALK 84
>UniRef50_Q6BH44 Cluster: Similar to CA2827|CaRAD2 Candida albicans
CaRAD2; n=1; Debaryomyces hansenii|Rep: Similar to
CA2827|CaRAD2 Candida albicans CaRAD2 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 1034
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/95 (32%), Positives = 55/95 (57%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSH 342
+G++ L + P A + + ++ +K+A+DAS+ +YQFL AVR + + +H
Sbjct: 1 MGVNSLWDILGPSA-RPVRLEALSRKKLAVDASIWIYQFLKAVRDQEGNSMP-----QAH 54
Query: 343 LMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLN 447
++G F R +L+ GI P++VFDG P +K +N
Sbjct: 55 IVGFFRRICKLLYFGIYPIFVFDGGAPALKRQTIN 89
>UniRef50_A7EV70 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1188
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +1
Query: 238 RKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGK 417
+++A+DAS+ +YQFL AVR + + SH++G F R +L+ +GIKPV+VFDG
Sbjct: 25 KRLAVDASIWIYQFLKAVRDKEGNALR-----NSHIVGFFRRICKLLFHGIKPVFVFDGG 79
Query: 418 PPDMK 432
P +K
Sbjct: 80 APILK 84
>UniRef50_A6RKP9 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 904
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +1
Query: 238 RKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGK 417
+++A+DAS+ +YQFL AVR + + SH++G F R +L+ +GIKPV+VFDG
Sbjct: 25 KRLAVDASIWIYQFLKAVRDKEGNALR-----NSHIVGFFRRICKLLFHGIKPVFVFDGG 79
Query: 418 PPDMK 432
P +K
Sbjct: 80 APILK 84
>UniRef50_A3B6B8 Cluster: Putative uncharacterized protein; n=4;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 670
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1
Query: 484 LQKATEAGDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGV 603
L +A E GD +++KF++R VKVTKQH+EE K+LL+LMGV
Sbjct: 24 LTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGV 63
>UniRef50_A4RG52 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1269
Score = 55.2 bits (127), Expect = 1e-06
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +++ A EM + +++A+DAS+ +YQFL AVR + +
Sbjct: 1 MGVNGLWQVLQPCARPTKLEMLNR----KRLAVDASIWIYQFLKAVRDKEGNALR----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
SH++G F R +L+ GIKPV+VFDG P +K
Sbjct: 52 NSHVIGFFRRICKLLWFGIKPVFVFDGGAPVLK 84
>UniRef50_Q7SG44 Cluster: Putative uncharacterized protein
NCU07498.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU07498.1 - Neurospora crassa
Length = 1269
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = +1
Query: 238 RKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGK 417
+++AIDAS+ +YQFL AVR + + SH++G F R +L+ GIKPV+VFDG
Sbjct: 25 KRLAIDASIWIYQFLKAVRDKEGNALR-----NSHVVGFFRRICKLLWYGIKPVFVFDGG 79
Query: 418 PPDMK 432
P +K
Sbjct: 80 APALK 84
>UniRef50_A2QGE7 Cluster: Remark: ORF 3'truncated due to end of
contig; n=2; Pezizomycotina|Rep: Remark: ORF 3'truncated
due to end of contig - Aspergillus niger
Length = 187
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/93 (34%), Positives = 55/93 (59%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL ++ A + ++++ +++A+DAS+ +YQFL AVR + +
Sbjct: 1 MGVQGLWTVVHPCA----RPIKLETLNKKRLAVDASIWIYQFLKAVRDKEGNALR----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
SH++G F R +L+ GI+PV+VFDG P +K
Sbjct: 52 NSHIVGFFRRICKLLYFGIQPVFVFDGGAPVLK 84
>UniRef50_A7RTI4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 250
Score = 54.4 bits (125), Expect = 2e-06
Identities = 42/166 (25%), Positives = 78/166 (46%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+ + K + +++ G+ +A+DAS+ + Q + +R V
Sbjct: 1 MGVKGLWQLLEPVG----KPVTLESLQGKVLAVDASILMNQAIKGMRDGSGNPVP----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
+HL F+R +L+ +KPV+VFDG P +K L ++ T +
Sbjct: 52 NAHLFVLFHRLCKLLFYRVKPVFVFDGGVPVLKKKTLVRAYLEEMQTNLNREQRTLQSER 111
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
A + R +V+ + E+++LL+L GV L+ P+ + L
Sbjct: 112 A---RQARASAEVSTEMLNESQELLRLFGVPFLVSPMEAEAQCAFL 154
>UniRef50_Q754D7 Cluster: AFR133Cp; n=1; Eremothecium gossypii|Rep:
AFR133Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 970
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +1
Query: 187 DIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRT 366
DI + +++++ ++A+DAS+ +YQFL A R + + +H++G F R
Sbjct: 8 DILGPTARPVKLESLSNNRMAVDASIWIYQFLKAARDKNGNRLK-----GAHIIGFFRRI 62
Query: 367 IRLVENGIKPVYVFDGKPPDMK 432
+L+ GIKPV+VFDG P +K
Sbjct: 63 CKLLYFGIKPVFVFDGGVPPLK 84
>UniRef50_Q10Q89 Cluster: XPG I-region family protein, expressed;
n=3; Oryza sativa|Rep: XPG I-region family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1477
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/116 (26%), Positives = 59/116 (50%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+A + + + ++ G+++A+DAS+ + QF+ A+R + ++
Sbjct: 1 MGVHGLWELLAPVG----RRVSVETLAGKRLAVDASIWMVQFMRAMRDDKGDMIR----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
+HL+G R +L+ +PV+VFDG P +K L ++K E
Sbjct: 52 DAHLLGFLRRICKLLFLRARPVFVFDGATPALKRRTLAARRRHRDAAQAKVRKTAE 107
>UniRef50_UPI00006D0076 Cluster: XPG I-region family protein; n=1;
Tetrahymena thermophila SB210|Rep: XPG I-region family
protein - Tetrahymena thermophila SB210
Length = 648
Score = 53.2 bits (122), Expect = 5e-06
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Frame = +1
Query: 136 YLNQIK-MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQL 312
YL I+ MGI GL LI A++ + + G+K AIDA LY+ G
Sbjct: 24 YLKNIQNMGIQGLQNLIKP----ALEFTSLHQFKGQKAAIDAMSFLYKGCY-----GYSY 74
Query: 313 VSVDGETTSHLMGTFYRTIRLVE-NGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQ 489
GE T M R +R+V+ NGI+P+ VFDG+ K +
Sbjct: 75 QLNKGEQTREYMLFLLRIVRVVKLNGIEPIVVFDGRNLKAKDFTIKKREETKEKNLQKAN 134
Query: 490 KATEAGDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
+ E G+ K+ +R ++V K+ + +L+ + L+ P V L
Sbjct: 135 ELMEQGNKNEAIKYYQRCLRVNKEMIYDTIDMLRANNIEYLISPYEADSQVAYL 188
>UniRef50_Q568J1 Cluster: Zgc:110269; n=4; Danio rerio|Rep:
Zgc:110269 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 333
Score = 52.4 bits (120), Expect = 9e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = +1
Query: 205 VKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVEN 384
++ EI +Y G+ IA+D S+ + QF A+ S L G FYRT+ +E+
Sbjct: 1 MRSKEIGDYSGKIIALDTSIVVNQFRSALPGH---------LKLSPLAGLFYRTLAFLEH 51
Query: 385 GIKPVYVFDGKPPDMK 432
IKPV+V DGKPP+ K
Sbjct: 52 DIKPVFVLDGKPPNQK 67
>UniRef50_UPI000058838C Cluster: PREDICTED: similar to XPGC protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to XPGC protein - Strongylocentrotus purpuratus
Length = 1102
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/116 (27%), Positives = 52/116 (44%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+ + + +++ G+ IA+D S+ L Q ++ V +
Sbjct: 1 MGVQGLWRLVESTG----RPVNLESLEGKVIAVDVSIWLNQAVLGVHGNSL--------S 48
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL F R +L+ IKP++VFDG PP +K L +K TE
Sbjct: 49 NPHLQVLFNRICKLLFYRIKPIFVFDGAPPQLKKQTLAARRQRKNLAAARTEKTTE 104
>UniRef50_Q0V4Z7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1308
Score = 48.0 bits (109), Expect = 2e-04
Identities = 35/98 (35%), Positives = 54/98 (55%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL ++ A + ++I+ +++A+DAS+ +YQFL AVR D E
Sbjct: 1 MGVTGLWTVLQPCA----RPIKIETLNKKRLAVDASIWIYQFLKAVR---------DKE- 46
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLN 447
+G F R +L+ GIKPV+VFDG P +K +N
Sbjct: 47 ----VGFFRRVCKLLFIGIKPVFVFDGGAPVLKRQTIN 80
>UniRef50_UPI0000DB70EE Cluster: PREDICTED: similar to CG10890-PC,
isoform C; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG10890-PC, isoform C - Apis mellifera
Length = 1047
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/93 (32%), Positives = 53/93 (56%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+ K++ ++ G+ +AID S+ ++Q L +G Q + +
Sbjct: 1 MGVYGLWRLLNATG----KQVPLETLEGKVLAIDISIWIHQVL-----QGYQDRFGNPKP 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+HL+G F+R +L+ IKP++VFDG P +K
Sbjct: 52 NAHLIGLFHRICKLLYYKIKPIFVFDGGVPMLK 84
>UniRef50_UPI0000E4749C Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1102
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTS- 339
+G+ L +AP E I++ G+KIA+D ++ L V S+ + + G +
Sbjct: 1 MGVQNLWQILAP-VKSEESIESLKGKKIAVDLAIWL------VESQVTGMKMMQGRVSKP 53
Query: 340 HLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQL 444
HL F+RT + G+K V+V DG PP++K ++
Sbjct: 54 HLRNLFFRTSIFLRLGVKLVFVIDGTPPELKWEEI 88
>UniRef50_Q0UPI5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 969
Score = 45.2 bits (102), Expect = 0.001
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNY--FGR--KIAIDASMSLYQFLIAVRSEGAQLVSV 321
MGI G+ K I A+ ++ ++ + GR +IAID S+ L+Q S+GAQ
Sbjct: 1 MGIHGIYKEIGPGRRIALSKLALEKFEDTGRPLRIAIDTSIWLFQIQA---SKGAQCDDA 57
Query: 322 --DGETTSHLMGTFYRTIRLVENGIKPVYVFDG--KPP 423
G T L +YR +RL+ I PV+VFDG KPP
Sbjct: 58 PKSGGTNPALRTFYYRLLRLIALSIHPVFVFDGPNKPP 95
>UniRef50_Q54AQ1 Cluster: Xeroderma pigmentosum group G (XPG) family
protein; n=1; Dictyostelium discoideum AX4|Rep:
Xeroderma pigmentosum group G (XPG) family protein -
Dictyostelium discoideum AX4
Length = 977
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/90 (28%), Positives = 51/90 (56%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSH 342
+G+ KL ++ + ++I G+ +AIDAS+ ++ F+ +++E D T +
Sbjct: 1 MGVPKLW-ELLQQSGTSIDINALEGKTLAIDASIWIHTFIRTLKNEKG-----DPMTNAP 54
Query: 343 LMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
++G F R +L+ +KP++VFDG P +K
Sbjct: 55 ILGFFRRICKLLSLRVKPIFVFDGGVPYLK 84
>UniRef50_UPI0000DA3193 Cluster: PREDICTED: similar to excision
repair cross-complementing rodent repair deficiency,
complementation group 5; n=4; Rattus norvegicus|Rep:
PREDICTED: similar to excision repair
cross-complementing rodent repair deficiency,
complementation group 5 - Rattus norvegicus
Length = 1072
Score = 44.4 bits (100), Expect = 0.002
Identities = 33/116 (28%), Positives = 54/116 (46%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRPVSPEALE---GKVLAVDISIWLNQALKGVRDRHGNAIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
+HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLAKRRQKKDSASIDSRKTTE 107
>UniRef50_Q8L6Z7 Cluster: Exonuclease, putative; n=5; core
eudicotyledons|Rep: Exonuclease, putative - Arabidopsis
thaliana (Mouse-ear cress)
Length = 665
Score = 44.0 bits (99), Expect = 0.003
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADI-APHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGE 330
MGI GL L+ I P +KE+E G +A+D L++ ++ E + +
Sbjct: 1 MGIQGLLPLLKSIMVPIHIKELE-----GCIVAVDTYSWLHKGALSCSRELCKGLP---- 51
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
T H+ +R L +G+KP+ VFDG P MK Q N + G+
Sbjct: 52 TKRHIQYCMHRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGN 111
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
+++ + + V ++ + E Q+L+ V ++ P
Sbjct: 112 SSAAYECYSKAVDISPSIAHELIQVLRQENVDYVVAP 148
>UniRef50_Q4SHZ0 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 866
Score = 42.7 bits (96), Expect = 0.007
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+ K + + G+ +A+D S+ L Q + VR V
Sbjct: 1 MGVHGLWRLLESTG----KPINPETLEGKILAVDISIWLNQAVKGVRDREGNSVQ----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQL 444
+HL+ F+R +L+ I+PV+VFDG+ P +K L
Sbjct: 52 NAHLLTLFHRICKLLFFRIRPVFVFDGEAPLLKKQTL 88
>UniRef50_P28715 Cluster: DNA-repair protein complementing XP-G
cells; n=27; Eumetazoa|Rep: DNA-repair protein
complementing XP-G cells - Homo sapiens (Human)
Length = 1186
Score = 42.3 bits (95), Expect = 0.010
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>UniRef50_Q4DC01 Cluster: DNA repair protein RAD2, putative; n=2;
Trypanosoma cruzi|Rep: DNA repair protein RAD2, putative
- Trypanosoma cruzi
Length = 744
Score = 41.5 bits (93), Expect = 0.017
Identities = 29/94 (30%), Positives = 51/94 (54%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+ + + ++ G+++AIDAS+ + QF A+ S +
Sbjct: 1 MGVHGLWRLLDTFG----EVTQPSDWRGKRVAIDASIWMSQFR-------AKCTSGENME 49
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
L G F R ++L+ GI+PV+VFDG ++K+
Sbjct: 50 QCILEGFFLRILKLLFYGIEPVFVFDGTATNLKS 83
>UniRef50_Q4AEJ2 Cluster: XPG; n=2; Gallus gallus|Rep: XPG - Gallus
gallus (Chicken)
Length = 1118
Score = 40.7 bits (91), Expect = 0.030
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + V ++ G+ +A+D S+ L Q + VR +
Sbjct: 1 MGVQGLWKLL-ECTGRPVNPETLE---GKILAVDISIWLNQAVKGVRDRHGNTIQ----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQL 444
+HL+ F R +L+ I+PV+VFDG+ P +K L
Sbjct: 52 NAHLLTLFNRLCKLLFFRIRPVFVFDGEAPLLKRQTL 88
>UniRef50_Q60GC1 Cluster: Exonuclease-1; n=7; Magnoliophyta|Rep:
Exonuclease-1 - Oryza sativa subsp. japonica (Rice)
Length = 836
Score = 40.7 bits (91), Expect = 0.030
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADI-APHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGE 330
MGI GL + I AP V+ ++ G+ +A+D L++ ++ G +L
Sbjct: 1 MGIQGLLPQLKSIMAPIGVEALK-----GQTVAVDTYSWLHKGALSC---GDRLCK-GLP 51
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
TT H+ +R L +G+KP+ VFDG MK Q ++ AG+
Sbjct: 52 TTRHIEYCMHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGN 111
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
+ + + ++ V +T + + E Q+LK V ++ P
Sbjct: 112 SRAAFECYQKAVDITPRIAFELIQVLKQEKVDYIVAP 148
>UniRef50_A2DAM0 Cluster: XPG N-terminal domain containing protein;
n=1; Trichomonas vaginalis G3|Rep: XPG N-terminal domain
containing protein - Trichomonas vaginalis G3
Length = 317
Score = 40.3 bits (90), Expect = 0.039
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSH 342
+G++ L+ + P VK I + G++IAID + L++ A + ++ +T
Sbjct: 1 MGINNLLPSVKP-VVKHGHISLFSGKRIAIDGYVWLHRSAFACAKQ-----LLEDPSTPL 54
Query: 343 LMGTFYRTIRLVE-NGIKPVYVFDGKPPDMKA 435
++ + I +++ NG++P +VFDG+P KA
Sbjct: 55 ILNYCKKNIEMLKSNGLQPYFVFDGRPLPGKA 86
>UniRef50_Q9UQ84 Cluster: Exonuclease 1; n=22; Mammalia|Rep:
Exonuclease 1 - Homo sapiens (Human)
Length = 846
Score = 39.9 bits (89), Expect = 0.052
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>UniRef50_P14629 Cluster: DNA-repair protein complementing XP-G
cells homolog; n=4; Xenopus|Rep: DNA-repair protein
complementing XP-G cells homolog - Xenopus laevis
(African clawed frog)
Length = 1196
Score = 39.9 bits (89), Expect = 0.052
Identities = 27/97 (27%), Positives = 50/97 (51%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + + ++ G+ +A+D S+ L Q + R +
Sbjct: 1 MGVQGLWKLL-ECSGRPINPGTLE---GKILAVDISIWLNQAVKGARDRQGNAIQ----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQL 444
+HL+ F+R +L+ I+P++VFDG+ P +K L
Sbjct: 52 NAHLLTLFHRLCKLLFFRIRPIFVFDGEAPLLKRQTL 88
>UniRef50_O44737 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 829
Score = 39.5 bits (88), Expect = 0.068
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL K++ A E+ ++ G+K+AID S+ +YQ AQL +
Sbjct: 1 MGITGLWKIVEPTAT----EIPLECLEGKKLAIDVSIWIYQ---------AQLAYPSDQP 47
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDG-KPPDMKAHQL 444
HL R +L+ I+PV+VFDG + P +K L
Sbjct: 48 FPHLRLLVNRLSKLLFYKIRPVFVFDGPQVPPLKRQVL 85
>UniRef50_O96154 Cluster: DNA repair endonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair endonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1516
Score = 39.1 bits (87), Expect = 0.090
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 259 SMSLYQFLIAVRSEG-AQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+MS++ L SE + + D +HL F R +L+ I+P+++FDG PP++K
Sbjct: 54 NMSIFNDLWIDFSENISSEIKTDNIKKAHLYFFFLRICKLLYYNIRPIFIFDGNPPELK 112
>UniRef50_UPI0000ECC8A8 Cluster: Exonuclease 1 (EC 3.1.-.-) (hExo1)
(Exonuclease I) (hExoI).; n=2; Gallus gallus|Rep:
Exonuclease 1 (EC 3.1.-.-) (hExo1) (Exonuclease I)
(hExoI). - Gallus gallus
Length = 798
Score = 38.7 bits (86), Expect = 0.12
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A A +K Y G+ +A+DA L++ S G GE
Sbjct: 1 MGIQGLLQFIKEAAEPA----HVKKYRGQAVAVDAYCWLHK-----GSYGCAEKLARGEP 51
Query: 334 TSHLMGTFYRTI-RLVENGIKPVYVFDG 414
T H + + + L+ GIKPV VFDG
Sbjct: 52 TDHYVVFCMKLVDMLLSFGIKPVLVFDG 79
>UniRef50_Q2VQ32 Cluster: Single strand DNA repair-like protein;
n=5; Magnoliophyta|Rep: Single strand DNA repair-like
protein - Triticum monococcum (Einkorn wheat) (Small
spelt)
Length = 646
Score = 38.7 bits (86), Expect = 0.12
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +1
Query: 235 GRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRL-VENGIKPVYVFD 411
GR++A+D S + A+R+ H+ TF+RT+ L + G PV+V D
Sbjct: 25 GRRVAVDLSFWIVSHSTAIRARSPHA------RRPHVRNTFFRTLSLFAKMGAFPVFVVD 78
Query: 412 GKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHSEEAKQLLK 591
G+P +K+ + EA AS + + + ++ +LLK
Sbjct: 79 GEPSPLKSQARAARFFRGSGVDPPASSSAEAEGEASAPAPVKARNAIFTRCVKDCVELLK 138
Query: 592 LMGVRLL 612
+G+ +L
Sbjct: 139 NLGMPVL 145
>UniRef50_Q4U9E4 Cluster: Endonuclease (Xp-g/RAD2 homologue),
putative; n=6; Aconoidasida|Rep: Endonuclease (Xp-g/RAD2
homologue), putative - Theileria annulata
Length = 899
Score = 38.7 bits (86), Expect = 0.12
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +1
Query: 169 LSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS--EGAQLVSVDGETTSH 342
LS+ +++ + + ++++ FG+ AID S + L + + G +V+V
Sbjct: 66 LSQAVSEASKNITNSQQVESLFGKVCAIDGSFWISHCLASESNMRHGGDIVAV------- 118
Query: 343 LMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
F R L++ GIKPV+VFDG P K
Sbjct: 119 ---FFLRICYLLDRGIKPVFVFDGCSPFAK 145
>UniRef50_Q38DL8 Cluster: DNA repair protein RAD2, putative; n=1;
Trypanosoma brucei|Rep: DNA repair protein RAD2,
putative - Trypanosoma brucei
Length = 746
Score = 38.7 bits (86), Expect = 0.12
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+ D + + K G+++AIDAS+ + QF RS SV+
Sbjct: 1 MGVHGLWRLL-DTFGEVTQPADWK---GKRVAIDASIWIAQF----RSSCEPGESVEERI 52
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDG 414
L G F R ++L+ GI+P++VFDG
Sbjct: 53 ---LEGFFMRILKLLFYGIEPIFVFDG 76
>UniRef50_A5KBK9 Cluster: DNA repair endonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair endonuclease, putative
- Plasmodium vivax
Length = 1473
Score = 38.7 bits (86), Expect = 0.12
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIA----VRSEGA----- 306
MG+ GL ++A + E+ + G++IAID S+ LY+ A V GA
Sbjct: 1 MGVKGLWSIVAPVGVRVNPEI----FTGKRIAIDVSIWLYELTYANNLKVLRNGAVDNMS 56
Query: 307 ----------QLVSVDGETTS----HLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+ ++ D T + HL F R +L+ I+P+++FDG PP++K
Sbjct: 57 IFNDLWMDFSEQMNTDMRTDNLKKVHLYFFFLRICKLLYYNIRPIFIFDGTPPELK 112
>UniRef50_Q4Y208 Cluster: DNA repair endonuclease, putative; n=3;
Plasmodium (Vinckeia)|Rep: DNA repair endonuclease,
putative - Plasmodium chabaudi
Length = 1281
Score = 38.3 bits (85), Expect = 0.16
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVD--- 324
MG+ GL ++A I E+ + G++IAID S+ LY+ + + ++ + D
Sbjct: 1 MGVKGLWSIVAPIGVRVNPEI----FTGKRIAIDVSIWLYELIYGNNLKSSRNNNFDDLG 56
Query: 325 ---------GETTS----------HLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLN 447
E S HL F R +L+ I+P+++FDG PP++K +
Sbjct: 57 VFNDLWLDFSEQNSDLKLSNLKKGHLYFFFLRICKLLYYNIRPIFIFDGTPPELKKRTIF 116
Query: 448 XXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHSEE 573
++K E + +++ L+K+ K+ E+
Sbjct: 117 QRNLKRKNNEEKVKKTAE---KLIYNYYHKSLLKLLKKQKEK 155
>UniRef50_P53695 Cluster: Exodeoxyribonuclease 1; n=1;
Schizosaccharomyces pombe|Rep: Exodeoxyribonuclease 1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 571
Score = 38.3 bits (85), Expect = 0.16
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL L+ + K ++ + G+ + +D + L++ + E ++ + ET
Sbjct: 1 MGIKGLLGLLKPMQ----KSSHVEEFSGKTLGVDGYVWLHKAVFTCAHE----LAFNKET 52
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
+L ++ + L G+KP+ VFDG P KA
Sbjct: 53 DKYLKYAIHQALMLQYYGVKPLIVFDGGPLPCKA 86
>UniRef50_Q803U7 Cluster: Exonuclease 1; n=4; Danio rerio|Rep:
Exonuclease 1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 806
Score = 38.3 bits (85), Expect = 0.16
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I D A + M +K Y G+ +A+D L++ + + A+ GE
Sbjct: 1 MGIQGLLQFIKD----ASEPMHVKKYRGQTVAVDTYCWLHKGAFSCAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTI-RLVENGIKPVYVFDGKP-PDMKAHQLNXXXXXXXXXXXXLQKATEAG 507
T + + + L+ G+KP+ VFDG+ P + + + Q E
Sbjct: 52 TDQYVSYCMKFVDMLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQANLQKGKQLLREGK 111
Query: 508 DTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
T + + F R V +T + + + + GV ++ P
Sbjct: 112 ITEARECFTRS-VNITPSMAHDVIRAARTRGVDCVVAP 148
>UniRef50_Q6ZN37 Cluster: CDNA FLJ16464 fis, clone BRHIP2012360;
n=19; Eutheria|Rep: CDNA FLJ16464 fis, clone
BRHIP2012360 - Homo sapiens (Human)
Length = 908
Score = 37.9 bits (84), Expect = 0.21
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ L +++ + H + ++N G+ IA+D S+ + + + G+ +
Sbjct: 1 MGVNDLWQILEPVKQH----IPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVM------- 49
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
HL F+R L + +K V+V +G+PP +KA
Sbjct: 50 KPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKA 83
>UniRef50_A4HN29 Cluster: DNA repair protein RAD2, putative; n=3;
Leishmania|Rep: DNA repair protein RAD2, putative -
Leishmania braziliensis
Length = 1029
Score = 37.5 bits (83), Expect = 0.28
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL +L+ D ++ E+K G+++AIDAS+ + QF V GE
Sbjct: 112 MGVRGLWRLL-DSFGVVLQPDELK---GKRVAIDASIWIAQFRARV---------APGED 158
Query: 334 TSH--LMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
H L G R ++L+ I+PV+VFDG K+
Sbjct: 159 IEHRVLEGFLARILKLLFYDIRPVFVFDGTASSSKS 194
>UniRef50_Q4U2Q2 Cluster: XPG variant; n=7; Drosophila
melanogaster|Rep: XPG variant - Drosophila melanogaster
(Fruit fly)
Length = 1257
Score = 37.1 bits (82), Expect = 0.36
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+ +HL+G F+R +L+ ++PV++FDG P +K
Sbjct: 72 SNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLK 105
>UniRef50_Q4JR61 Cluster: Putative uncharacterized protein; n=1;
Babesia sp. WA1|Rep: Putative uncharacterized protein -
Babesia sp. WA1
Length = 954
Score = 37.1 bits (82), Expect = 0.36
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRS--EGAQLVSVDG 327
MG+ GL +A A I+ GRK AIDAS + L++ + G + ++
Sbjct: 1 MGVSGLWDAVAAAGLCA----RIEALHGRKCAIDASFWIAHALVSQENLRRGFDIYAI-- 54
Query: 328 ETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQL 444
F + L+E I+P++VFDG PPD K L
Sbjct: 55 --------FFLKICYLLETRIRPIFVFDGIPPDAKRRTL 85
>UniRef50_A2E2N7 Cluster: XPG N-terminal domain containing protein;
n=1; Trichomonas vaginalis G3|Rep: XPG N-terminal domain
containing protein - Trichomonas vaginalis G3
Length = 402
Score = 37.1 bits (82), Expect = 0.36
Identities = 25/88 (28%), Positives = 47/88 (53%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL LI + +++ +I ++ G+ +D + L++ I+ + A+ +
Sbjct: 1 MGITGLLSLIHPV----LRKCKIGDFKGKTAGVDGFVWLHRGCISCAKDIAKNLPCK--- 53
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGK 417
S++ R L++NGIKP+ VFDG+
Sbjct: 54 -SYISFFMKRAQMLIDNGIKPIIVFDGR 80
>UniRef50_A4RDX6 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 780
Score = 37.1 bits (82), Expect = 0.36
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI+GL L+ I + E+K + G +A+DA L++ ++ E AQ G+
Sbjct: 1 MGIVGLLPLLKSIQ----RPTELKKFAGETLAVDAYGWLHRGAVSCALELAQ-----GKP 51
Query: 334 TSHLMGTFYRTIRLVEN-GIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
T + +R+V+ G P VFDG KA + +AG
Sbjct: 52 TRKYVDFAMHRVRMVKYFGATPYIVFDGDFLPSKALTEASRAKRREESKKAGMELLKAGK 111
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
A + ++ + VT + + E + LK + V ++ P
Sbjct: 112 PAQAYQEFQKAIDVTPEMARELIEELKKIDVPYVVAP 148
>UniRef50_Q9U9Q6 Cluster: GM10765p; n=3; Sophophora|Rep: GM10765p -
Drosophila melanogaster (Fruit fly)
Length = 726
Score = 36.7 bits (81), Expect = 0.48
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSH 342
+G+ +L + PH ++ I G+K+AID L E +V H
Sbjct: 1 MGVKELWGVLTPHCERK-PINELRGKKVAID--------LAGWVCESLNVVDYFVHPRHH 51
Query: 343 LMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
L F+RT L+ + PV+V +G P +K+
Sbjct: 52 LKNLFFRTCYLIWEQVTPVFVLEGVAPKLKS 82
>UniRef50_Q7PWJ6 Cluster: ENSANGP00000021368; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021368 - Anopheles gambiae
str. PEST
Length = 1243
Score = 36.3 bits (80), Expect = 0.64
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 337 SHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+H++G F+R +L+ IKP++VFDG P +K
Sbjct: 72 AHVLGLFHRLCKLMYYRIKPIFVFDGGAPLLK 103
>UniRef50_Q8STM5 Cluster: Similarity to DNA repair protein RAD2;
n=1; Encephalitozoon cuniculi|Rep: Similarity to DNA
repair protein RAD2 - Encephalitozoon cuniculi
Length = 562
Score = 36.3 bits (80), Expect = 0.64
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 361 RTIRLVENGIKPVYVFDGKPPDMKAHQL 444
R ++L+ + I P++VFDGK P+MK H +
Sbjct: 50 RIVKLLYHRIHPIFVFDGKAPEMKRHAI 77
>UniRef50_Q9UTN2 Cluster: Uncharacterized protein C139.01c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C139.01c - Schizosaccharomyces pombe (Fission yeast)
Length = 802
Score = 36.3 bits (80), Expect = 0.64
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
M I L+ I D H K + ++ K+ IDAS L Q + + + Q ++V+GE+
Sbjct: 1 MTIRSLNLFIID-KKHQHKS-SLSSFQNCKLGIDASFYLTQIIHSFTPQELQSLAVNGES 58
Query: 334 --TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
H + F +R EN I P++VF+G P +A
Sbjct: 59 EYLQHRISEFLEQLR-TEN-ITPIFVFNGIPLTFEA 92
>UniRef50_Q00XT2 Cluster: 5'-3' exonuclease; n=2; Ostreococcus|Rep:
5'-3' exonuclease - Ostreococcus tauri
Length = 987
Score = 35.9 bits (79), Expect = 0.84
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 322 DGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
D + G F R RL+ +GI PV+VFDG P +K
Sbjct: 3 DDAAAAPARGFFRRIARLLHHGITPVFVFDGAAPGLK 39
>UniRef50_A7RUB0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 194
Score = 35.9 bits (79), Expect = 0.84
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 340 HLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
HL F+R +L G+K V+V DG+PP++K
Sbjct: 52 HLRNLFFRIWQLTRCGVKLVFVVDGEPPELK 82
>UniRef50_Q9W6K2 Cluster: Exonuclease 1; n=4; Xenopus|Rep:
Exonuclease 1 - Xenopus laevis (African clawed frog)
Length = 734
Score = 35.9 bits (79), Expect = 0.84
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 1/157 (0%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + + + A + + +K Y G+ +A+D L++ A + A+ GE
Sbjct: 1 MGIQGLLQFLKE----ASEPVHVKKYKGKTVAVDTYCWLHKGAFACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGD 510
T + + + L+ G+KP+ VFDG K ++ G
Sbjct: 52 TDQYVQFCMKLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQTNLQKGKQLLREGK 111
Query: 511 TASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
A + R V +T + E + + GV ++ P
Sbjct: 112 LAEARECFSRSVNITSSMAHEVIKAARSEGVDYIVAP 148
>UniRef50_Q01FW1 Cluster: Exonuclease, putative; 92014-93872; n=2;
Ostreococcus|Rep: Exonuclease, putative; 92014-93872 -
Ostreococcus tauri
Length = 1004
Score = 35.5 bits (78), Expect = 1.1
Identities = 32/131 (24%), Positives = 55/131 (41%)
Frame = +1
Query: 229 YFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVF 408
Y G K+ +DA + L++ A E + V +TT H+ R L +G++ V+VF
Sbjct: 23 YGGAKVCVDAYVWLHRGAYACSRELCEGV----KTTKHVEYFVNRARGLRRSGVEAVFVF 78
Query: 409 DGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDTASVDKFNRRLVKVTKQHSEEAKQLL 588
DG KA + + G+ ++ ++ R V VT + + E + L
Sbjct: 79 DGGRLPGKAAEEAQRRRNRREALDKAKTHARNGNASAANECYVRAVDVTPEMAREVIEAL 138
Query: 589 KLMGVRLLMHP 621
+ G L P
Sbjct: 139 EREGFECLTAP 149
>UniRef50_Q8WZX1 Cluster: Related to DNA repair endonuclease rad2;
n=2; Neurospora crassa|Rep: Related to DNA repair
endonuclease rad2 - Neurospora crassa
Length = 1037
Score = 35.5 bits (78), Expect = 1.1
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +1
Query: 154 MGILGLSKLIAD---IAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVD 324
MGI G+ K I I+ A+ ++ GR + + +S++QF Q+++
Sbjct: 1 MGIKGIYKEIGPGQRISLTALATTHLETT-GRPLRLAIDISIWQF---------QILAAR 50
Query: 325 GETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLN 447
G + + FYR +RL+ + I+P++VFDG P+ A + N
Sbjct: 51 GGSNPAVRTLFYRLVRLLGHAIQPLFVFDG--PNKPAFKRN 89
>UniRef50_Q4WXC8 Cluster: Exonuclease, putative; n=3;
Eurotiomycetidae|Rep: Exonuclease, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 658
Score = 35.5 bits (78), Expect = 1.1
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL L+ I K +K + G+ + +DA L++ +A LV +D T
Sbjct: 1 MGIKGLHGLLKSIQ----KPCHVKKFKGQTLGVDAYGWLHRGTVAC---AVDLV-LDRPT 52
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDG 414
T H+ R L+ G+ P VFDG
Sbjct: 53 TKHVEFVLNRVRMLLYFGVTPYLVFDG 79
>UniRef50_Q4P9S2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 828
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL L+ D+ + + +Y G+ + IDA + L++ + G V G+
Sbjct: 1 MGIQGLLPLLKDVQ----NSVHVSSYAGKTLGIDAYVWLHR-----GAYGCAREIVLGDP 51
Query: 334 TSHLMGTFYRTIRLVEN-GIKPVYVFDG 414
T + IR++++ G+KP VFDG
Sbjct: 52 TPRYIAHAVSRIRMLQHFGVKPYLVFDG 79
>UniRef50_Q91FF5 Cluster: 369L; n=1; Invertebrate iridescent virus
6|Rep: 369L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 415
Score = 35.1 bits (77), Expect = 1.5
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI L+K I + A I +KIAID M +Y++ ++ + +
Sbjct: 1 MGIKNLTKFIKEKCQEAYVTENINELSFKKIAIDTPMYMYKYKSMNAAKMVENNGIYYNP 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
L Y L ++ I P+++ +G P+ K
Sbjct: 61 DGWLWSFIYFIYSLRKHDIHPIFILEGGYPEEK 93
>UniRef50_A7ASU9 Cluster: Rad2 endonuclease, putative; n=1; Babesia
bovis|Rep: Rad2 endonuclease, putative - Babesia bovis
Length = 1002
Score = 35.1 bits (77), Expect = 1.5
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL +A A +E+ G+K+AIDAS + L SE A D
Sbjct: 1 MGIKGLWDAVA--AAGVSSRVELLR--GKKVAIDASFWISHCLA---SEAALRRGND--- 50
Query: 334 TSHLMGTFY-RTIRLVENGIKPVYVFDGKPPDMKAHQL 444
+ G F+ R L+E I P++VFDG+ P K L
Sbjct: 51 ---IYGVFFLRICYLLEKRIYPIFVFDGRTPGAKRRTL 85
>UniRef50_O58354 Cluster: Putative uncharacterized protein PH0620;
n=4; Thermococcaceae|Rep: Putative uncharacterized
protein PH0620 - Pyrococcus horikoshii
Length = 664
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 187 DIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRT 366
DI K+ + ++F KI +LY+ L +RS+ +V++D T L R
Sbjct: 10 DIISENPKKFAVVSWFNGKIEKKGEFTLYRLLKFIRSKRPDIVAIDSVT--ELGNDLKRF 67
Query: 367 IRLVENGIKPVYVFDGKPPDMKA 435
+R + G K V V G+P + K+
Sbjct: 68 LRELPEGTKLVQV-TGRPGEQKS 89
>UniRef50_Q54ED2 Cluster: 5'3'-exonuclease N-and I-domain-containing
protein; n=1; Dictyostelium discoideum AX4|Rep:
5'3'-exonuclease N-and I-domain-containing protein -
Dictyostelium discoideum AX4
Length = 1046
Score = 34.7 bits (76), Expect = 1.9
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSH 342
+G+S L+ ++P K + +K+Y +++AID L++ + E V G T +
Sbjct: 1 MGISGLLPALSP-VTKAIHVKDYANKRVAIDGYSWLHKGAYSCSQE-----IVLGIPTRN 54
Query: 343 LMGTFYRTIR-LVENGIKPVYVFDGKP-PDMK 432
+ F I+ L+ + PV +FDG P P+ K
Sbjct: 55 YINYFISRIKMLISYKVIPVVIFDGGPLPNKK 86
>UniRef50_UPI000023CEE4 Cluster: hypothetical protein FG04386.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04386.1 - Gibberella zeae PH-1
Length = 790
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 235 GRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDG 414
GR + I ++++QF +++ AQ G T + FYR +RL+ ++P++VFDG
Sbjct: 30 GRPLRIAIDVAIWQF----QNQAAQ-----GGTNPEIRTLFYRLVRLLACPVEPIFVFDG 80
>UniRef50_Q7R2G0 Cluster: GLP_623_40575_38077; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_40575_38077 - Giardia lamblia
ATCC 50803
Length = 832
Score = 34.3 bits (75), Expect = 2.6
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRK-IAIDASMSLYQFLIAVRSEGAQLVSVDGE 330
MGI GL +++ ++ K + +Y +K +++D S LY + E +
Sbjct: 1 MGIAGLWNILSQMS----KGLNRADYLNKKTVSVDISGLLYSYYYTSSDEERK------- 49
Query: 331 TTSHLMGTFYRTIRLVENGIKPVYVFD-GKPPDMKAHQL 444
H+ TF R++ G+ PV+VFD G P +K +L
Sbjct: 50 -NYHVRATFLIITRILSLGLMPVFVFDSGAPHWLKTEEL 87
>UniRef50_A7EKN6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 749
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 307 QLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDG--KPP 423
Q+ + G T L +YR +RL+ ++P++VFDG KPP
Sbjct: 45 QIQAGQGGTNPALRTLYYRLLRLLSISVQPLFVFDGPHKPP 85
>UniRef50_UPI0000DB6CF0 Cluster: PREDICTED: similar to XPG-like
endonuclease CG10670-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to XPG-like endonuclease CG10670-PA -
Apis mellifera
Length = 614
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 340 HLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+L ++RTI L+ GI PV+V +GK P +K
Sbjct: 51 YLRNLYFRTIFLLMQGILPVFVLEGKAPALK 81
>UniRef50_Q7QCK4 Cluster: ENSANGP00000021102; n=2; Culicidae|Rep:
ENSANGP00000021102 - Anopheles gambiae str. PEST
Length = 500
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 340 HLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 432
+L F+RT L++ GI PV+V +G P +K
Sbjct: 51 YLRNLFFRTCYLLQTGITPVFVLEGTAPPLK 81
>UniRef50_UPI0000D57844 Cluster: PREDICTED: similar to CG10387-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG10387-PA - Tribolium castaneum
Length = 563
Score = 33.1 bits (72), Expect = 5.9
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Frame = +1
Query: 163 LGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLV-SVDGETTS 339
+G+++L+ +A + + I + GR +AID+ L++ R QL + D ++
Sbjct: 1 MGVTQLLPFLAK-STRPCHISEFRGRTVAIDSYCWLHR---GARGCAMQLAKNEDVDSYV 56
Query: 340 HLMGTFYRTIRLVENGIKPVYVFDGK--PPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
H + +T L+ + I+P+ VFDG+ P MK + + G T
Sbjct: 57 HYCMKYIKT--LLSHDIRPIMVFDGRHLPAKMKTEEKRRESKKLARKQG--MECLRLGHT 112
Query: 514 ASVDKFNRRLVKVTKQ 561
+ KF + + VT +
Sbjct: 113 SDAYKFFAQSIDVTPE 128
>UniRef50_Q4PAK0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 864
Score = 33.1 bits (72), Expect = 5.9
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 235 GRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDG 414
G ++ IDAS+ L+ A++S G HL FYR +L+ + PV+VFDG
Sbjct: 36 GLRLGIDASLWLFH---ALQSSGG--------ANPHLRLLFYRLAKLLSLPVLPVFVFDG 84
Query: 415 -KPPDMKAHQL 444
K P K +L
Sbjct: 85 PKRPTWKRGKL 95
>UniRef50_Q2GQN1 Cluster: Putative uncharacterized protein; n=6;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1331
Score = 33.1 bits (72), Expect = 5.9
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL L+ I H + +E+K Y G +DA L++ +A E AQ G+
Sbjct: 1 MGISGLLPLLKSI--H--RPIELKKYAGETFGVDAYGWLHRGAVACAMELAQ-----GKP 51
Query: 334 TSHLMGTFYRTIRLVEN-GIKPVYVFDG 414
T + +R+ + G+ P VFDG
Sbjct: 52 TRKYVDFAMHRVRMFKYFGVTPYLVFDG 79
>UniRef50_Q1E1S0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 813
Score = 33.1 bits (72), Expect = 5.9
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 241 KIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGK- 417
+IAID S+ L+Q ++ AQ G L FYR RL+ + P++VFDG
Sbjct: 83 RIAIDVSIWLFQ------AQAAQ-----GGLNPELRALFYRLARLISLPVHPIFVFDGSG 131
Query: 418 PPDMKAHQL 444
P+ K +L
Sbjct: 132 RPEYKRGKL 140
>UniRef50_UPI000049908F Cluster: exonuclease I; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: exonuclease I - Entamoeba
histolytica HM-1:IMSS
Length = 497
Score = 32.7 bits (71), Expect = 7.8
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL ++ + ++ +K G ++AID L++ + E + + +G +
Sbjct: 1 MGITGLKGIVNTVC----RKRTLKELKGIRVAIDGYAWLHRASASCSEELCENIPTNGLS 56
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDG 414
+ + G + L+ N I P++VFDG
Sbjct: 57 SFCVKGA----LTLLNNEITPIFVFDG 79
>UniRef50_UPI0000162BF3 Cluster: DNA repair protein, putative; n=1;
Arabidopsis thaliana|Rep: DNA repair protein, putative -
Arabidopsis thaliana
Length = 570
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 340 HLMGTFYRTIRLVEN-GIKPVYVFDGKPPDMKA 435
HL TF+RTI L G PV+V DG P +K+
Sbjct: 51 HLRLTFFRTINLFSKFGAYPVFVVDGTPSPLKS 83
>UniRef50_A0NI45 Cluster: Alpha-glucosidase; n=2; Firmicutes|Rep:
Alpha-glucosidase - Oenococcus oeni ATCC BAA-1163
Length = 808
Score = 32.7 bits (71), Expect = 7.8
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 136 YLNQIKMGILGLSKLIADIAPHAVK-EMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQL 312
Y Q +G +S+L DI P K E ++Y + D Y + L
Sbjct: 687 YPAQNYVGEKKISQLTLDIYPFTGKGESCYEHYQDDGESFDYRSGSYNLYDFILKRSGNL 746
Query: 313 VSVDGETTSHLMGTFYRTIRLVENGIKPV-YVFDGK 417
+ ++ T G Y++ + + NGIKP+ ++ DG+
Sbjct: 747 IEINISKTREAYGEKYQSFKFIINGIKPLEFLVDGQ 782
>UniRef50_Q9LPD2 Cluster: F22M8.2 protein; n=4; core
eudicotyledons|Rep: F22M8.2 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 497
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 340 HLMGTFYRTIRLVEN-GIKPVYVFDGKPPDMKA 435
HL TF+RTI L G PV+V DG P +K+
Sbjct: 51 HLRLTFFRTINLFSKFGAYPVFVVDGTPSPLKS 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,211,401
Number of Sequences: 1657284
Number of extensions: 9618306
Number of successful extensions: 23502
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 22627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23431
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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