Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_E12
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein. 199 8e-51
L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein. 199 8e-51
CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein. 199 8e-51
BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific... 199 8e-51
BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific... 199 8e-51
AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific... 199 8e-51
AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein. 199 8e-51
X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein. 42 0.001
L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein p... 42 0.001
BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair cross-c... 42 0.001
AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair cross-c... 42 0.001
AL157769-7|CAI14529.1| 142|Homo sapiens excision repair cross-c... 42 0.001
AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair cross-c... 42 0.001
AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein... 42 0.001
AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum c... 42 0.001
AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum c... 42 0.001
X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum gro... 42 0.003
BC007491-1|AAH07491.1| 846|Homo sapiens exonuclease 1 protein. 40 0.008
AL365366-8|CAI15658.1| 846|Homo sapiens exonuclease 1 protein. 40 0.008
AL365366-5|CAI15655.1| 135|Homo sapiens exonuclease 1 protein. 40 0.008
AF549168-1|AAN39382.1| 846|Homo sapiens exonuclease 1 protein. 40 0.008
AF091754-2|AAC69880.1| 803|Homo sapiens exonuclease Ia protein. 40 0.008
AF091754-1|AAC69879.1| 846|Homo sapiens exonuclease Ib protein. 40 0.008
AF091740-1|AAC63043.1| 803|Homo sapiens exonuclease 1a protein. 40 0.008
AF084974-1|AAD13754.1| 846|Homo sapiens exonuclease I protein. 40 0.008
AF060479-1|AAC33874.1| 800|Homo sapiens exonuclease I protein. 40 0.008
AF042282-1|AAC32259.1| 803|Homo sapiens Hex1 protein. 40 0.008
AC004783-1|AAC32424.1| 803|Homo sapiens Hex1 protein. 40 0.008
D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein. 40 0.010
BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein FL... 38 0.031
BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein FL... 38 0.031
AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens ... 38 0.031
AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein comp... 34 0.51
>X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein.
Length = 380
Score = 199 bits (485), Expect = 8e-51
Identities = 98/166 (59%), Positives = 120/166 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD+AP A++E +IK+YFGRK+AIDASMS+YQFLIAVR G L + +GET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG FYRTIR++ENGIKPVYVFDGKPP +K+ +L LQ+A AG
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
V+KF +RLVKVTKQH++E K LL LMG+ L P + S L
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAAL 166
>L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein.
Length = 380
Score = 199 bits (485), Expect = 8e-51
Identities = 98/166 (59%), Positives = 120/166 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD+AP A++E +IK+YFGRK+AIDASMS+YQFLIAVR G L + +GET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG FYRTIR++ENGIKPVYVFDGKPP +K+ +L LQ+A AG
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
V+KF +RLVKVTKQH++E K LL LMG+ L P + S L
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAAL 166
>CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein.
Length = 380
Score = 199 bits (485), Expect = 8e-51
Identities = 98/166 (59%), Positives = 120/166 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD+AP A++E +IK+YFGRK+AIDASMS+YQFLIAVR G L + +GET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG FYRTIR++ENGIKPVYVFDGKPP +K+ +L LQ+A AG
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
V+KF +RLVKVTKQH++E K LL LMG+ L P + S L
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAAL 166
>BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 199 bits (485), Expect = 8e-51
Identities = 98/166 (59%), Positives = 120/166 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD+AP A++E +IK+YFGRK+AIDASMS+YQFLIAVR G L + +GET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG FYRTIR++ENGIKPVYVFDGKPP +K+ +L LQ+A AG
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
V+KF +RLVKVTKQH++E K LL LMG+ L P + S L
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAAL 166
>BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 199 bits (485), Expect = 8e-51
Identities = 98/166 (59%), Positives = 120/166 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD+AP A++E +IK+YFGRK+AIDASMS+YQFLIAVR G L + +GET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG FYRTIR++ENGIKPVYVFDGKPP +K+ +L LQ+A AG
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
V+KF +RLVKVTKQH++E K LL LMG+ L P + S L
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAAL 166
>AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 199 bits (485), Expect = 8e-51
Identities = 98/166 (59%), Positives = 120/166 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD+AP A++E +IK+YFGRK+AIDASMS+YQFLIAVR G L + +GET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG FYRTIR++ENGIKPVYVFDGKPP +K+ +L LQ+A AG
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
V+KF +RLVKVTKQH++E K LL LMG+ L P + S L
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAAL 166
>AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein.
Length = 380
Score = 199 bits (485), Expect = 8e-51
Identities = 98/166 (59%), Positives = 120/166 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL+KLIAD+AP A++E +IK+YFGRK+AIDASMS+YQFLIAVR G L + +GET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG FYRTIR++ENGIKPVYVFDGKPP +K+ +L LQ+A AG
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHPVRLKPSVQLL 651
V+KF +RLVKVTKQH++E K LL LMG+ L P + S L
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAAL 166
>X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein.
Length = 1186
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein
protein.
Length = 1186
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 1186
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>AL157769-7|CAI14529.1| 142|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 142
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein
ERCC5 protein.
Length = 1186
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 1186
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 232
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/116 (28%), Positives = 53/116 (45%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
>X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum group
G complementing factor protein.
Length = 88
Score = 41.5 bits (93), Expect = 0.003
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQL 444
HL+ F+R +L+ I+P++VFDG P +K L
Sbjct: 52 NPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTL 88
>BC007491-1|AAH07491.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AL365366-8|CAI15658.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AL365366-5|CAI15655.1| 135|Homo sapiens exonuclease 1 protein.
Length = 135
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AF549168-1|AAN39382.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AF091754-2|AAC69880.1| 803|Homo sapiens exonuclease Ia protein.
Length = 803
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AF091754-1|AAC69879.1| 846|Homo sapiens exonuclease Ib protein.
Length = 846
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AF091740-1|AAC63043.1| 803|Homo sapiens exonuclease 1a protein.
Length = 803
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AF084974-1|AAD13754.1| 846|Homo sapiens exonuclease I protein.
Length = 846
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AF060479-1|AAC33874.1| 800|Homo sapiens exonuclease I protein.
Length = 800
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AF042282-1|AAC32259.1| 803|Homo sapiens Hex1 protein.
Length = 803
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>AC004783-1|AAC32424.1| 803|Homo sapiens Hex1 protein.
Length = 803
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL + I + A + + ++ Y G+ +A+D L++ IA + A+ GE
Sbjct: 1 MGIQGLLQFIKE----ASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAK-----GEP 51
Query: 334 TSHLMGTFYRTIR-LVENGIKPVYVFDG 414
T +G + + L+ +GIKP+ VFDG
Sbjct: 52 TDRYVGFCMKFVNMLLSHGIKPILVFDG 79
>D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein.
Length = 1185
Score = 39.5 bits (88), Expect = 0.010
Identities = 32/116 (27%), Positives = 52/116 (44%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ GL KL+ + + V ++ G+ +A+D S+ L Q L VR +
Sbjct: 1 MGVQGLWKLL-ECSGRQVSPEALE---GKILAVDISIWLNQALKGVRDRHGNSIE----- 51
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
H + F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 52 NPHPLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 107
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
G P + AP EAEAQCA L
Sbjct: 780 GIPYIQAPMEAEAQCAVL 797
>BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 37.9 bits (84), Expect = 0.031
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ L +++ + H + ++N G+ IA+D S+ + + + G+ +
Sbjct: 1 MGVNDLWQILEPVKQH----IPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVM------- 49
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
HL F+R L + +K V+V +G+PP +KA
Sbjct: 50 KPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKA 83
>BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 37.9 bits (84), Expect = 0.031
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ L +++ + H + ++N G+ IA+D S+ + + + G+ +
Sbjct: 1 MGVNDLWQILEPVKQH----IPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVM------- 49
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
HL F+R L + +K V+V +G+PP +KA
Sbjct: 50 KPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKA 83
>AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens
cDNA FLJ16464 fis, clone BRHIP2012360. ).
Length = 908
Score = 37.9 bits (84), Expect = 0.031
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MG+ L +++ + H + ++N G+ IA+D S+ + + + G+ +
Sbjct: 1 MGVNDLWQILEPVKQH----IPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVM------- 49
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKA 435
HL F+R L + +K V+V +G+PP +KA
Sbjct: 50 KPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKA 83
>AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein
complementing XP-G cells variant protein.
Length = 1611
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 340 HLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATE 501
HL+ F+R +L+ I+P++VFDG P +K L +K TE
Sbjct: 479 HLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTE 532
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,375,150
Number of Sequences: 237096
Number of extensions: 1380018
Number of successful extensions: 2622
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2615
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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