Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_E12
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell death-re... 189 2e-48
AC024791-9|AAF60653.1| 382|Caenorhabditis elegans Cell-death-re... 189 2e-48
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 40 0.002
U13019-9|AAC24447.1| 434|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical pr... 30 1.6
U40421-2|AAA81438.1| 453|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC090999-11|ABD63207.1| 356|Caenorhabditis elegans Hypothetical... 28 6.6
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 27 8.7
>AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell
death-related nuclease 1 protein.
Length = 382
Score = 189 bits (460), Expect = 2e-48
Identities = 93/156 (59%), Positives = 113/156 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GLS++IAD AP A+K E+K +FGR +AIDASM LYQFLIAVR +G+QL S DGET
Sbjct: 1 MGIKGLSQVIADNAPSAIKVNEMKAFFGRTVAIDASMCLYQFLIAVRQDGSQLQSEDGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG RT+R+ ENG+KPVYVFDGKPPDMK +L L +A E GD
Sbjct: 61 TSHLMGMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAEAEKALTEAKEKGDV 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
+KF RRLVKVTKQ ++EAK+LL LMG+ ++ P
Sbjct: 121 KEAEKFERRLVKVTKQQNDEAKRLLGLMGIPVVEAP 156
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
G PVV+APCEAEAQCA L
Sbjct: 149 GIPVVEAPCEAEAQCAHL 166
>AC024791-9|AAF60653.1| 382|Caenorhabditis elegans
Cell-death-related nuclease protein1 protein.
Length = 382
Score = 189 bits (460), Expect = 2e-48
Identities = 93/156 (59%), Positives = 113/156 (72%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GLS++IAD AP A+K E+K +FGR +AIDASM LYQFLIAVR +G+QL S DGET
Sbjct: 1 MGIKGLSQVIADNAPSAIKVNEMKAFFGRTVAIDASMCLYQFLIAVRQDGSQLQSEDGET 60
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMKAHQLNXXXXXXXXXXXXLQKATEAGDT 513
TSHLMG RT+R+ ENG+KPVYVFDGKPPDMK +L L +A E GD
Sbjct: 61 TSHLMGMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAEAEKALTEAKEKGDV 120
Query: 514 ASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
+KF RRLVKVTKQ ++EAK+LL LMG+ ++ P
Sbjct: 121 KEAEKFERRLVKVTKQQNDEAKRLLGLMGIPVVEAP 156
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 597 GCPVVDAPCEAEAQCAAL 650
G PVV+APCEAEAQCA L
Sbjct: 149 GIPVVEAPCEAEAQCAHL 166
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +1
Query: 154 MGILGLSKLIADIAPHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGET 333
MGI GL K++ A E+ ++ G+K+AID S+ +YQ AQL +
Sbjct: 1 MGITGLWKIVEPTAT----EIPLECLEGKKLAIDVSIWIYQ---------AQLAYPSDQP 47
Query: 334 TSHLMGTFYRTIRLVENGIKPVYVFDG-KPPDMKAHQL 444
HL R +L+ I+PV+VFDG + P +K L
Sbjct: 48 FPHLRLLVNRLSKLLFYKIRPVFVFDGPQVPPLKRQVL 85
>U13019-9|AAC24447.1| 434|Caenorhabditis elegans Hypothetical
protein T12A2.8 protein.
Length = 434
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +1
Query: 193 APHAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIR 372
A H V+++ + + ++ID + LY+ L + Q + S+L+ F R R
Sbjct: 10 ANHVVRKVPNETMRDKTLSIDGHIWLYESLKGCEAHHQQTPN------SYLVTFFTRIQR 63
Query: 373 LVENGIKPVYVFDGKPPDMKAHQ 441
L+E I P+ VFD AH+
Sbjct: 64 LLELKIIPIVVFDNINASSSAHE 86
>Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical
protein C08F8.2b protein.
Length = 719
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 355 FYRTIRLVENGIKPVYVFDGKPPDMKAHQ 441
F+ + +L ENGIKP ++ PP K Q
Sbjct: 366 FFNSKKLEENGIKPAVIYGDLPPGTKLAQ 394
>Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical
protein C08F8.2a protein.
Length = 721
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 355 FYRTIRLVENGIKPVYVFDGKPPDMKAHQ 441
F+ + +L ENGIKP ++ PP K Q
Sbjct: 368 FFNSKKLEENGIKPAVIYGDLPPGTKLAQ 396
>U40421-2|AAA81438.1| 453|Caenorhabditis elegans Hypothetical
protein C02B8.5 protein.
Length = 453
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 611 NNRTPINLRSCLASSLCCFVTLTK 540
NNRTP ++ CL + CC +TK
Sbjct: 225 NNRTPPRVKLCLPPTECCNRRMTK 248
>AC090999-11|ABD63207.1| 356|Caenorhabditis elegans Hypothetical
protein Y82E9BR.4 protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 267 LISVPYRRKK*RSPTSLCRRRDYITSD 347
+ + YRRK PT+L R R+ I +D
Sbjct: 1 MFQIKYRRKNREKPTNLARERENIKND 27
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 505 GDTASVDKFNRRLVKVTKQHSEEAKQLLKLMGVRLLMHP 621
G V +FN R+V + +QH++ A QLL + + P
Sbjct: 386 GRNLDVLRFNFRVVMLNQQHNQAAPQLLNVQRPHQIQPP 424
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,997,162
Number of Sequences: 27780
Number of extensions: 238045
Number of successful extensions: 590
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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