Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_E05
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0129 + 41243686-41243853,41243936-41244053,41245485-412455...   120   1e-27
12_02_1237 + 27245411-27245842                                         32   0.46 
09_06_0311 + 22218219-22218421,22219157-22219422,22219881-222200...    32   0.46 
07_03_0840 + 21935504-21936424,21936516-21938177                       28   5.6  
07_03_0839 + 21916842-21917852,21917944-21919602                       28   5.6  
07_03_0669 - 20542481-20542489,20543212-20543872,20543899-205439...    28   5.6  
04_01_0575 - 7454421-7455707                                           28   7.5  
03_06_0774 + 36171177-36173099                                         28   7.5  
02_01_0314 + 2106976-2107658,2107792-2107931,2108367-2108636,210...    28   7.5  
11_04_0296 + 15992285-15992385,15992792-15993011                       27   9.9  
05_07_0101 - 27690927-27691208,27691695-27692474                       27   9.9  

>01_07_0129 +
           41243686-41243853,41243936-41244053,41245485-41245532,
           41245756-41245787
          Length = 121

 Score =  120 bits (288), Expect = 1e-27
 Identities = 53/102 (51%), Positives = 73/102 (71%)
 Frame = +3

Query: 192 SLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 371
           +L+  S  K+FGG+   + H S+ L C M FS++LPP        LP+LY+LSGLTC+++
Sbjct: 13  ALEQMSRTKMFGGHNLRFRHHSATLGCPMTFSVFLPPSPASD---LPVLYWLSGLTCNDE 69

Query: 372 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGV 497
           NF+TK+G QR AA HG+ +V PDTSPRG+ I+G+  SWDFGV
Sbjct: 70  NFVTKAGAQRAAAAHGIALVAPDTSPRGLNIEGEADSWDFGV 111


>12_02_1237 + 27245411-27245842
          Length = 143

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 480 SWDFGVSAGFYLDATNEPWNNN 545
           ++DFG+ AGF++  TN P+N +
Sbjct: 42  AYDFGIPAGFFVPGTNNPYNGD 63


>09_06_0311 + 22218219-22218421,22219157-22219422,22219881-22220050,
            22220149-22220365,22220798-22221021,22221559-22221738,
            22221875-22222013,22222107-22222255,22223394-22223505,
            22223998-22224506,22224661-22224784,22224904-22225178,
            22225507-22225626,22225707-22225769,22225861-22226052,
            22226381-22226440,22226535-22226738,22226926-22227051,
            22227093-22227254,22227357-22227476,22227665-22227820,
            22227895-22227957,22228041-22228168,22228524-22228920,
            22229442-22229544,22229646-22229776,22230096-22230167,
            22230472-22230553,22231083-22231190,22231288-22231429,
            22231659-22231698,22231746-22231876,22232215-22232301,
            22232395-22232605,22232687-22232741,22232836-22232927,
            22233011-22233071,22233361-22233719
          Length = 2010

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 480  SWDFGVSAGFYLDATNEPWNNNYRMGSYLN 569
            SW +G+  G Y +  N PW +N    +++N
Sbjct: 1287 SWQYGLDQGLYSEGKNYPWFSNGSSNAFIN 1316


>07_03_0840 + 21935504-21936424,21936516-21938177
          Length = 860

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
 Frame = +3

Query: 225 GGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFITKSGFQRY 404
           G  Q + +H S + +  +  S   P    G DV+LP+L Y+S       N   K+G    
Sbjct: 304 GIVQVLLNHPSCKPRLGLAASAENPVDFSGVDVRLPMLVYISREKRPGYNHQKKAGAMNV 363

Query: 405 AAEHGVIVVGPDTSPRGVKIDGD---DSSWDFGVSAGFYLDATNEPWNN 542
                 ++     +P  +  DGD   ++S  F     F LD       N
Sbjct: 364 MLRVSALL---SNAPFVINFDGDHYVNNSQAFRAPMCFMLDGRGRGGEN 409


>07_03_0839 + 21916842-21917852,21917944-21919602
          Length = 889

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
 Frame = +3

Query: 225 GGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFITKSGFQRY 404
           G  Q + +H S + +  +  S   P    G DV+LP+L Y+S       N   K+G    
Sbjct: 334 GIVQVLLNHPSCKPRLGLAASAENPVDFSGVDVRLPMLVYISREKRPGYNHQKKAGAMNV 393

Query: 405 AAEHGVIVVGPDTSPRGVKIDGD---DSSWDFGVSAGFYLDATNEPWNN 542
                 ++     +P  +  DGD   ++S  F     F LD       N
Sbjct: 394 MLRVSALL---SNAPFVINFDGDHYVNNSQAFRAPMCFMLDGRGRGGEN 439


>07_03_0669 -
           20542481-20542489,20543212-20543872,20543899-20543983,
           20545311-20546625
          Length = 689

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 288 IYLPPQAEGGDVKLP-LLYYLSGLTCSEQNFITKSGFQRYAA 410
           ++LP  A+GG   LP ++Y+  G  C+E  F     + RYAA
Sbjct: 69  LFLPSGADGGRRLLPVVVYFHGGCFCTESAF--GRTYHRYAA 108


>04_01_0575 - 7454421-7455707
          Length = 428

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +3

Query: 291 YLPPQAE-GGDVKLPLLYYLSGLT 359
           +LP  A+ GGD  LPLL YL+ LT
Sbjct: 50  HLPANADDGGDTPLPLLPYLAHLT 73


>03_06_0774 + 36171177-36173099
          Length = 640

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -1

Query: 267 LIQMMHENTLFDNHQKFYWTILIASCPCLISDEPPEKLYSQLSCNHYLP 121
           L+ ++H     D      WT LIA   C   DE     +SQ+  +  LP
Sbjct: 305 LLDLLHTFHAVDKPNVVSWTALIAGLACHGRDEEAFLAFSQMRLSGVLP 353


>02_01_0314 +
           2106976-2107658,2107792-2107931,2108367-2108636,
           2109938-2110254
          Length = 469

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 477 SSWDFGVSAGFYLDATNEPWN 539
           SSWD  V  GF   AT  PW+
Sbjct: 297 SSWDNPVPGGFKFTATKAPWS 317


>11_04_0296 + 15992285-15992385,15992792-15993011
          Length = 106

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 438 DTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMG 557
           D  PRG +I    +    G  AG Y   T EP  +NYRMG
Sbjct: 32  DNRPRGGRICTTSNLVASGSIAGDY--GTGEPTAHNYRMG 69


>05_07_0101 - 27690927-27691208,27691695-27692474
          Length = 353

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 502 ALTPKSHDESSPSILTPRGEVSGPTTITPC 413
           A+T  S  E  P +  P+G  +GP  + PC
Sbjct: 3   AITAPSSIEHIPLVRCPKGANAGPQAVIPC 32


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,304,718
Number of Sequences: 37544
Number of extensions: 390597
Number of successful extensions: 725
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)