Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_E03
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    33   0.003
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.69 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.92 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 32.7 bits (71), Expect = 0.003
 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = +2

Query: 317 QVGDYEFTKQDIIGHGAFAMV---YKGRKRKNPSQSVAVKVVTKKGIQKASXILVKEXKI 487
           ++G  + + Q +IG GAF +V   +   K  N +Q VAVK++ +    +      +E  I
Sbjct: 445 ELGPLKLSFQGVIGEGAFGIVRRAFLDLKEDNKTQ-VAVKMLKESPTSEEIRQFTQEINI 503

Query: 488 LRELTALQHKNLVAMHDCMDS--PAYVYVVMEYC 583
           ++ +   QH  +V++  C+         +V+EYC
Sbjct: 504 MKSVR--QHPYIVSLIGCVTEGRAEGPLLVVEYC 535


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = -3

Query: 429 TFTATDWDGFFLFL--PL*-----TIAKAPCPIISCLVNS*SPTWITSIFTNFPLTTDMI 271
           TF  T W  F +FL  P       TI    C + +  + +    WI ++F N  L+  + 
Sbjct: 406 TFMRTVWKFFNIFLITPFYNFNENTIHSKLCKLYATFLIALKLVWIVALFKNENLSEMVK 465

Query: 270 QILFT 256
           Q LFT
Sbjct: 466 QFLFT 470


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +2

Query: 290 GKLVKMEVIQVGDYEFTKQDIIGHGAFAMVYKGRKRKNPSQSV--AVKVVTKKGIQKASX 463
           G LV    +Q  D+   ++ +  H A      G    +   SV  AVK  TKKG  K+  
Sbjct: 354 GSLVDFINLQAFDFHREREPVADHHANLYSRPGDSGLDLFLSVDYAVKFWTKKGFPKSKI 413

Query: 464 IL 469
           +L
Sbjct: 414 VL 415


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 397 KESVPVCCGEGGH 435
           + S P  CGE GH
Sbjct: 31  RNSAPSICGEHGH 43


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 105 SLVFLFCELNSLAPYRPG 158
           +L+F  CEL +  P  PG
Sbjct: 90  ALIFEKCELATCTPREPG 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,856
Number of Sequences: 336
Number of extensions: 2752
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)