Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_E01
         (386 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0893 - 8789491-8791416                                           27   5.2  
07_03_0698 - 20765305-20768526                                         27   5.2  
03_06_0071 + 31465707-31466237,31467455-31468075,31468438-314685...    26   9.1  

>08_01_0893 - 8789491-8791416
          Length = 641

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 62  SASATLQRNDRSVRWHIP 9
           S  A L R +R +RWHIP
Sbjct: 552 SPKAVLNRAERELRWHIP 569


>07_03_0698 - 20765305-20768526
          Length = 1073

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 107 PHEFGTVTKNAVVEIRSRNQRRTSARKW 190
           P E  T  +     +R RNQRRT+A  W
Sbjct: 134 PVEVTTTMEPRDASVRPRNQRRTNAGSW 161


>03_06_0071 +
           31465707-31466237,31467455-31468075,31468438-31468520,
           31468895-31468979
          Length = 439

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 86  YTF*WKTGSASATLQRNDRSVRWHIP 9
           Y F  + GSASA ++  D SV W  P
Sbjct: 95  YEFRARAGSASALVRLADESVEWRHP 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,821,127
Number of Sequences: 37544
Number of extensions: 81697
Number of successful extensions: 199
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)