Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_D24
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   4.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.1  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 296 LIVLDSALLSSSVTVFFMMYEPSG 225
           L+   SAL+ +++T F ++YE  G
Sbjct: 126 LVYCSSALVLAAMTTFHLIYEAHG 149


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 296 LIVLDSALLSSSVTVFFMMYEPSG 225
           L+   SAL+ +++T F ++YE  G
Sbjct: 122 LVYCSSALVLAAMTTFHLIYEAHG 145


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 249 LYDVRTIRFGLKLLASFGCIIVV 181
           L+D  ++R GLK   +F C+ V+
Sbjct: 29  LHDNPSLREGLKGARTFRCVFVL 51


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 YDDATKRCEQLQSEPDGSYIIKNTVTE 264
           +DD  K+C+ +++ P+ +   K  +T+
Sbjct: 215 FDDVGKKCDWVRNVPECADWYKGRLTD 241


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 173 LPLTTMMQPKDASNFNPNRMV 235
           LP++T   P D   F+P  ++
Sbjct: 210 LPISTSSLPSDFYRFSPTGLI 230


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 173 LPLTTMMQPKDASNFNPNRMV 235
           LP++T   P D   F+P  ++
Sbjct: 102 LPISTSSLPSDFYRFSPTGLI 122


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 73  ILTTLSVIIATFFNMSVEASDSGKSDRKLYN 165
           IL  LSV +   +  S++ + +  ++ KLYN
Sbjct: 326 ILFYLSVFVILVYYASLDETPNPVTNGKLYN 356


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,808
Number of Sequences: 336
Number of extensions: 2433
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)