Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_D24
         (497 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0228 - 42154400-42154498,42155120-42155196,42156341-421564...    29   2.1  
06_01_0274 - 2027449-2027646,2027729-2027873,2028267-2028379,202...    28   3.6  
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    27   8.4  
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587...    27   8.4  
07_01_0169 - 1182240-1182253,1182887-1182964,1183518-1184640           27   8.4  
05_06_0243 - 26639497-26641173                                         27   8.4  

>01_07_0228 -
           42154400-42154498,42155120-42155196,42156341-42156425,
           42156511-42156956,42157070-42157194,42157273-42157523
          Length = 360

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +1

Query: 79  TTLSVIIATFFNMSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSEPDGSY 240
           TT+ V+I    NM +E+ +   SD K  N+V+  DY ++  +   + ++ DGS+
Sbjct: 4   TTVDVMIRKGTNMRLESYEF-LSDFKHGNAVVLLDYTESGNKGSFIVTQVDGSF 56


>06_01_0274 -
           2027449-2027646,2027729-2027873,2028267-2028379,
           2028466-2028484,2028876-2029189
          Length = 262

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 85  ELLKSSISFRIQAYVLSSCNPTTSNK 8
           ELL S+++ ++ AY    C+P T N+
Sbjct: 218 ELLTSTLAAKLNAYAAELCSPNTQNR 243


>10_08_0894 - 21365629-21365766,21365849-21365950,21366042-21366284,
            21366685-21366813,21366999-21367103,21367196-21367387,
            21367486-21367639,21368148-21368209,21368291-21368437,
            21368517-21368564,21369091-21369228,21369305-21369451,
            21370579-21370665,21370754-21370861,21370941-21371041,
            21371870-21371996,21372820-21372936,21373029-21373106,
            21373240-21373284,21373637-21373756,21373838-21373964,
            21374033-21374253,21374347-21374529,21374772-21374924,
            21375051-21375146,21375226-21375331,21375410-21375492,
            21375576-21375728,21375819-21376058,21376367-21376414,
            21376782-21376928,21377007-21377115,21377200-21377345,
            21377715-21377809,21377944-21378049,21378177-21378368,
            21378456-21378686,21378772-21378866,21379426-21379529,
            21380040-21380284,21380300-21380347,21380376-21380480,
            21380630-21380767,21381458-21381649,21381738-21381914,
            21382001-21382129,21382203-21382316,21382407-21382746,
            21382836-21383064,21383155-21383455,21384311-21384358,
            21387963-21388355
          Length = 2493

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
 Frame = +1

Query: 115  MSVEASDSGKSDRKLYNSVITADYDDATKRCEQL--QSEPDGSYIIKNTVTELLNNAESN 288
            + +   ++  S +++  S +    + AT+    L   S+ +G Y++ N +   L    ++
Sbjct: 2338 LQLNKMNASASAQQMNQSQLDVQIETATELFRNLVMNSDTEGRYLLLNAIANQLRYPNNH 2397

Query: 289  TINFSY---KLWTTGHQNIVQ 342
            T  FS+    L++  +Q IVQ
Sbjct: 2398 THYFSFIILYLFSEANQEIVQ 2418


>08_02_1091 + 24256025-24256190,24256806-24257978,24258066-24258733,
            24258994-24260065,24260241-24260563,24260647-24260835,
            24261400-24261506,24262103-24262163,24262617-24262634
          Length = 1258

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 217  QSEPDGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQS 345
            Q +PD + I KNTV  ++N   S+    S+ +  T   N V++
Sbjct: 1131 QKDPDDTEIRKNTVRVVINQLLSDEKTESFPILVTSGSNNVKA 1173


>07_01_0169 - 1182240-1182253,1182887-1182964,1183518-1184640
          Length = 404

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 1   ACVCWTSLDCKSSKRKLE 54
           AC CW +LDC+  +  L+
Sbjct: 97  ACPCWVALDCRHGRALLD 114


>05_06_0243 - 26639497-26641173
          Length = 558

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 157 LYNSVITADYDDATKRCEQLQ 219
           L NSV  A Y+D  K C QLQ
Sbjct: 272 LRNSVAKASYEDVFKSCPQLQ 292


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,382,372
Number of Sequences: 37544
Number of extensions: 220546
Number of successful extensions: 469
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)