Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_D24
         (497 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical pr...    33   0.15 
AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical ...    29   2.5  
AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical ...    28   3.3  
U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z83102-9|CAI79156.1|   82|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical
           protein F47H4.9 protein.
          Length = 569

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +2

Query: 98  LRHFSICRLKQVILANPTENYTIQ*LPLTTMMQPKDASNFNPNR 229
           LR+F    L++++L +PT+N  I+   L  M Q K+A NF  +R
Sbjct: 431 LRNFKSGILQEIVLGSPTDNADIE--KLVDMRQWKEAKNFESSR 472


>AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical
           protein Y47H10A.4 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 106 FFNMSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSE 225
           FFN+++E  DSG+ +    N V   DY   TK  E  Q +
Sbjct: 41  FFNLNIEVPDSGQGEN---NMVSFLDYISQTKCLEDAQPD 77


>AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.5 protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 195 CIIVVSGNY*IV*FSVGFARITCFNRHIEKCRNYNRQSC*NLQFHLE 55
           C+I ++ +  IV     F    CFNR++ +C    RQ   + Q H++
Sbjct: 122 CLICLASSPIIVTACDHFMHFACFNRYLTECLTGLRQEIQDAQKHMK 168


>U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical
           protein W03B1.8 protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 163 NSVIT-ADYDDATKRCEQLQSEPDGSYIIKNTVTELLNNA 279
           N+VI   DY+ A KR +QL  + +G  ++ + + E  NN+
Sbjct: 607 NTVIKLGDYEMARKRYDQLVKDCNGKCVLVDYLPEFYNNS 646


>Z83102-9|CAI79156.1|   82|Caenorhabditis elegans Hypothetical
           protein C54C8.12 protein.
          Length = 82

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 495 RYGGPRRHMRLYHHXW 448
           R+ GPRR  R YH  W
Sbjct: 65  RHAGPRRFYRFYHSNW 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,225,540
Number of Sequences: 27780
Number of extensions: 215243
Number of successful extensions: 579
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)