Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_D22
(490 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 194 1e-48
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 190 1e-47
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 161 8e-39
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 157 2e-37
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 152 5e-36
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 137 1e-31
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 134 1e-30
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 128 9e-29
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 124 1e-27
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 113 2e-24
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 99 5e-20
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 88 1e-16
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 75 6e-13
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 69 7e-11
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 67 2e-10
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 64 1e-09
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 64 2e-09
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 64 2e-09
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 63 4e-09
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 61 1e-08
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 54 1e-06
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 51 2e-05
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 50 2e-05
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 48 1e-04
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 46 6e-04
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 38 0.16
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.28
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 37 0.28
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 36 0.37
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 36 0.48
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 34 2.0
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 34 2.0
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 34 2.0
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 34 2.0
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 33 2.6
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 33 2.6
UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 33 3.4
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_UPI00015B5196 Cluster: PREDICTED: similar to cytochrome... 32 7.9
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 7.9
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 194 bits (472), Expect = 1e-48
Identities = 93/113 (82%), Positives = 99/113 (87%)
Frame = +2
Query: 8 KMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 187
K +TEKAFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPFTGN
Sbjct: 43 KTPRETEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGN 101
Query: 188 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 346
VSIRGRILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 102 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFR 154
Score = 62.5 bits (145), Expect = 5e-09
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 11 MADQTEKAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 139
MADQTE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
Score = 58.0 bits (134), Expect = 1e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLKV 428
DVEIGD+VT+GECRPLSKTVRFNVLKV
Sbjct: 155 DVEIGDVVTVGECRPLSKTVRFNVLKV 181
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 190 bits (463), Expect = 1e-47
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 11 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 172
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 173 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 346
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLKV 428
DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 161 bits (391), Expect = 8e-39
Identities = 73/109 (66%), Positives = 87/109 (79%)
Frame = +2
Query: 20 QTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 199
Q+E+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VSIR
Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIR 67
Query: 200 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 346
G+ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR
Sbjct: 68 GKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR 116
Score = 51.2 bits (117), Expect = 1e-05
Identities = 20/26 (76%), Positives = 26/26 (100%)
Frame = +3
Query: 351 VEIGDIVTIGECRPLSKTVRFNVLKV 428
V++GDIVT+G+CRP+SKTVRFNV+KV
Sbjct: 117 VQVGDIVTVGQCRPISKTVRFNVVKV 142
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 157 bits (380), Expect = 2e-37
Identities = 73/114 (64%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
Frame = +2
Query: 20 QTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 199
Q+E+AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF G VSIR
Sbjct: 8 QSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 200 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR-GRGD 358
GRILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR GD
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGD 118
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +3
Query: 360 GDIVTIGECRPLSKTVRFNVLKV 428
GD+VT+G+CRPLSKTVRFNVL+V
Sbjct: 117 GDVVTVGQCRPLSKTVRFNVLRV 139
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 152 bits (368), Expect = 5e-36
Identities = 69/111 (62%), Positives = 86/111 (77%), Gaps = 3/111 (2%)
Frame = +2
Query: 20 QTEKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 190
+ ++AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNV
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNV 93
Query: 191 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 343
S+RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F
Sbjct: 94 SVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAF 144
Score = 49.6 bits (113), Expect = 4e-05
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3
Query: 339 ASGDVEIGDIVTIGECRPLSKTVRFNVLKV 428
A G V+ GDIV G+CRPLSKTVRFNVLKV
Sbjct: 143 AFGPVKEGDIVVCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 137 bits (332), Expect = 1e-31
Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 5/111 (4%)
Frame = +2
Query: 20 QTEKAFQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 187
QT +QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 188 VSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 337
VSIRGRIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSP 116
Score = 52.0 bits (119), Expect = 7e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLKV 428
DV+ GD VT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVKEGDTVTVGECRPLSKTVRFNVLKV 145
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 134 bits (324), Expect = 1e-30
Identities = 74/141 (52%), Positives = 89/141 (63%), Gaps = 29/141 (20%)
Frame = +2
Query: 11 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 175
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 176 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 292
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 293 ---RFEKRHRNMSVHLSPCFR 346
R+EKRH N+ H+SPCFR
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR 141
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 351 VEIGDIVTIGECRPLSKTVRFNVLKV 428
V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 142 VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 128 bits (308), Expect = 9e-29
Identities = 55/94 (58%), Positives = 72/94 (76%)
Frame = +2
Query: 62 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 241
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 242 RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 343
RTI+IRR+YLH++ KY R++KRH++++VH SP F
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF 98
Score = 42.7 bits (96), Expect = 0.004
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLKV 428
D + GD V IG+CRPLSKT+R+NVL+V
Sbjct: 99 DPKQGDEVVIGQCRPLSKTIRYNVLEV 125
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 124 bits (298), Expect = 1e-27
Identities = 52/90 (57%), Positives = 65/90 (72%)
Frame = +2
Query: 77 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 256
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 257 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 346
RRDYLH++ KY RFEKRH+N+ H SPCFR
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR 105
Score = 48.4 bits (110), Expect = 8e-05
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = +3
Query: 351 VEIGDIVTIGECRPLSKTVRFNVLKV 428
V+ GD+VTIG+CRPLSKT+RFNVL++
Sbjct: 106 VQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 113 bits (272), Expect = 2e-24
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +2
Query: 29 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 208
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 209 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRGR---GDW*YCNDR 379
GVV+KMK ++TIV+ +Y+HY KY R+ +RH N SVH+SPCF G GD C +
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 380 R 382
R
Sbjct: 128 R 128
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 99.1 bits (236), Expect = 5e-20
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +2
Query: 62 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 241
N +G K R KN+GLGFKTPREAI+G Y+DKKCPFTG VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 242 RTIVIRRDYLHYL 280
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 87.8 bits (208), Expect = 1e-16
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +2
Query: 158 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLS 334
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLS 81
Score = 46.4 bits (105), Expect = 3e-04
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +3
Query: 354 EIGDIVTIGECRPLSKTVRFNVLKV 428
++GDIV I ECRP+SKTVRFNV+KV
Sbjct: 87 KVGDIVIIAECRPISKTVRFNVIKV 111
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 75.4 bits (177), Expect = 6e-13
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +2
Query: 89 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 268
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 269 LHYLPKYNRFEKRHRNMSVHLSPC 340
Y KY R+E+R + H PC
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPC 83
Score = 34.7 bits (76), Expect = 1.1
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLKV 428
D + GD V I ECRPLSKT F V++V
Sbjct: 85 DAQEGDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 68.5 bits (160), Expect = 7e-11
Identities = 24/60 (40%), Positives = 43/60 (71%)
Frame = +2
Query: 161 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 340
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Score = 39.9 bits (89), Expect = 0.030
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 345 GDVEIGDIVTIGECRPLSKTVRFNVLK 425
GDV +GD V I ECRPLSKT+ F V++
Sbjct: 80 GDVNVGDSVRIMECRPLSKTITFCVIE 106
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 104 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 283
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 284 KYNRFEKRHRNMSVHLSPCFRGR-GD 358
KY R+EKR + H C + GD
Sbjct: 59 KYQRYEKRRSKIHAHNPACISAKVGD 84
Score = 37.1 bits (82), Expect = 0.21
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 354 EIGDIVTIGECRPLSKTVRFNVLK 425
++GDIVTI ECRP+SKT F V+K
Sbjct: 81 KVGDIVTIVECRPISKTKSFVVVK 104
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +2
Query: 110 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 289
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 290 NRFEKRHRNMSVHLSPC 340
+RF KR + H C
Sbjct: 59 DRFMKRRSRVPAHAPDC 75
Score = 35.1 bits (77), Expect = 0.84
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKT 404
D+ +GD VTI ECRPLSKT
Sbjct: 77 DLAVGDTVTIAECRPLSKT 95
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = +2
Query: 104 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 283
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 284 KYNRFEKRHRNMSVHLSPCFR 346
KY R+ ++ RN+ HL C +
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK 108
Score = 31.9 bits (69), Expect = 7.9
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 351 VEIGDIVTIGECRPLSKTVRFNVL 422
V +GD V IGE RPL+K + F VL
Sbjct: 109 VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +2
Query: 104 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 283
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 284 KYNRFEKRHRNMSVHLSPCFR 346
KY R + + VH+ C +
Sbjct: 60 KYERKATKIKKYHVHVPDCIK 80
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 62.9 bits (146), Expect = 4e-09
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +2
Query: 161 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 340
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Score = 35.9 bits (79), Expect = 0.48
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 351 VEIGDIVTIGECRPLSKTVRFNVLKV 428
V+ GD+V IGE P+SKTV+F VL V
Sbjct: 86 VKEGDVVVIGETMPISKTVKFTVLGV 111
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 60.9 bits (141), Expect = 1e-08
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +2
Query: 104 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 283
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 284 KYNRFEKRHRNMSVHLSPC 340
KYNR+E+R + M V + C
Sbjct: 61 KYNRYERRRKRMRVRVPEC 79
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 54.4 bits (125), Expect = 1e-06
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +2
Query: 161 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 340
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +2
Query: 104 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 280
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 281 PKYNRFEKRHRNMSVHLSPCFRGR-GD 358
KY R ++ + + PC + GD
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCMEAKIGD 84
Score = 34.7 bits (76), Expect = 1.1
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLK 425
+ +IGDI+TI ECRPL+K F V++
Sbjct: 79 EAKIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 161 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 340
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 341 FR 346
+
Sbjct: 76 LK 77
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVL 422
D++ GD V IGE RPLSKT F VL
Sbjct: 78 DIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 48.0 bits (109), Expect = 1e-04
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 104 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 280
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 281 PKYNRFEKRHRNMSVHL 331
K+ R+ + + H+
Sbjct: 60 TKFKRYARGRSRIHAHV 76
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 45.6 bits (103), Expect = 6e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLKV 428
DV IG IVT+GEC+PLSKTVRF + KV
Sbjct: 45 DVHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 37.5 bits (83), Expect = 0.16
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 200 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRGRGD 358
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENFCVTGD 77
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 36.7 bits (81), Expect = 0.28
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -1
Query: 343 EARRQMYGHVPVPFLEPIVFG*VVKVIXXXXXXXXXXXXXXXAGEDAAADRNVASEGTLL 164
E+ R + ++ V F ++F V++VI G+D +D N SE T
Sbjct: 88 ESWRDVGSNILVSFFVSVIFWNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFF 147
Query: 163 VNVGTLNRLSGSFE 122
VNV T N FE
Sbjct: 148 VNVRTFNGSFWGFE 161
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 36.7 bits (81), Expect = 0.28
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 309 TGTCPYICRLASGDVEIGDIVTIGECRPLSKTVRFNVLKV 428
T + Y + G GD+V I ECRP+SKT + V KV
Sbjct: 43 TRSAKYHAHVEDGGAAAGDLVEIEECRPISKTKSWRVAKV 82
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 36.3 bits (80), Expect = 0.37
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 354 EIGDIVTIGECRPLSKTVRFNVLKV 428
E+GD V I ECRP+SKT F +++V
Sbjct: 67 EVGDFVKIAECRPISKTKHFRLVEV 91
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 35.9 bits (79), Expect = 0.48
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2
Query: 131 PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 310
P E ++ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 311 RNMS 322
R S
Sbjct: 159 RGKS 162
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 65 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTG 217
R G +R+D + H N G RE + GT+ K TG S G +TG
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTG 89
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 203 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH 328
+I+TG V M +TI + D L PKY++F ++ R H
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAH 45
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 324 YICRLASGDVEIGDIVTIGECRPLSKTVRFNVLKV 428
YI S V++GD++ ECRPLSK F++ KV
Sbjct: 47 YIVHDESNAVKVGDMIEAIECRPLSKRKSFSLHKV 81
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 33.9 bits (74), Expect = 2.0
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLKV 428
+ +IGD+V I E RPLSKT R+ V+++
Sbjct: 50 ECKIGDVVEIEETRPLSKTKRWRVVRI 76
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 357 IGDIVTIGECRPLSKTVRFNVLKV 428
+GD VTI CRP S T RF ++K+
Sbjct: 51 VGDAVTIQPCRPRSATKRFEIIKI 74
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 33.5 bits (73), Expect = 2.6
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 348 DVEIGDIVTIGECRPLSKTVRFNVLKV 428
+ +GDIV I E RPLSKT R+ V+K+
Sbjct: 61 ECRVGDIVMIRETRPLSKTKRWVVVKI 87
>UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 357
Score = 33.1 bits (72), Expect = 3.4
Identities = 24/94 (25%), Positives = 38/94 (40%)
Frame = +2
Query: 26 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 205
+K F T F KGG+ K++ L +K E+I G +R
Sbjct: 103 DKLFVSNDTYFKLMKGGLVCGYCHRPKDLNLDYKKGAESIYQKDFKPHACCKGVPRVRSD 162
Query: 206 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 307
G + M+ T V R DY+ + + N+ EK+
Sbjct: 163 FFGGFYTQQPMELTTVHRTDYIPHPLEKNKSEKK 196
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 33.1 bits (72), Expect = 3.4
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 53 VFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK----KCPFTGNV-SIRGRILTG 217
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 218 VVQKMKMQRTIVIRRDYLHYLPKYNRFEK 304
+ M+ + I+ +YL +NR +K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 26 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 205
EK Q + +N K+ +H + G+ + +E+I+ + DKK FTG + + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKI-LNGG 67
Query: 206 IL 211
IL
Sbjct: 68 IL 69
>UniRef50_UPI00015B5196 Cluster: PREDICTED: similar to cytochrome
P450 CYP4C39; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to cytochrome P450 CYP4C39 - Nasonia vitripennis
Length = 507
Score = 31.9 bits (69), Expect = 7.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 260 RDYLHYLPKYNRFEKRH-RNMSVHLSPCFRGRGDW*YCNDRRMQTFVQNS*IQCFESFKG 436
++++HY + ++ H R M + L P + R Y N +R QT + N +C E+ +
Sbjct: 212 KEFVHYTADFRMYKIIHNRMMKIWLYPDWIFRITSNYSNQKRAQTMIHNFTERCIEAGRQ 271
Query: 437 QGLEEVFQKILINLCL 484
L+E + +++ L
Sbjct: 272 DMLKEKSKTCILHRLL 287
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 63 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 182
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,324,498
Number of Sequences: 1657284
Number of extensions: 8895570
Number of successful extensions: 21291
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 20708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21281
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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